Pre_GI: BLASTP Hits

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Query: NC_007793:1574456:1574456 Staphylococcus aureus subsp. aureus USA300, complete genome

Start: 1574456, End: 1574746, Length: 291

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010079:1564327:158840315884031588693291Staphylococcus aureus subsp. aureus USA300_TCH1516, completehypothetical bacteriophage protein2e-51200
NC_017342:1765132:176486117648611765151291Staphylococcus aureus subsp. aureus TCH60 chromosome, completephi phage protein5e-51199
NC_017338:1517723:154179815417981542088291Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeVRR-NUC domain5e-51199
NC_017337:321155:339907339907340197291Staphylococcus aureus subsp. aureus ED133 chromosome, completephage protein5e-51199
NC_002953:998944:998944998944999234291Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein2e-50197
NC_002952:1592000:161833716183371618627291Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein2e-50197
NC_007168:1839382:184119918411991841477279Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein3e-34143
NC_003923:1533500:155766815576681557865198Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein1e-32138
NC_009699:2552195:255545625554562555737282Clostridium botulinum F str. Langeland chromosome, complete genomeVRR-NUC domain-containing protein1e-1582
NC_016048:4047922:406508440650844065365282Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-1580.5
NC_014393:4775452:481590048159004816178279Clostridium cellulovorans 743B chromosome, complete genomeVRR-NUC domain-containing protein2e-1477.4
NC_015519:2526047:252917425291742529452279Tepidanaerobacter sp. Re1 chromosome, complete genomeVRR-NUC domain-containing protein5e-1476.3
NC_014393:937000:947208947208947486279Clostridium cellulovorans 743B chromosome, complete genomeVRR-NUC domain-containing protein9e-1475.5
NC_017179:1683199:169872816987281699054327Clostridium difficile BI1, complete genomephage-like protein2e-1374.3
NC_013517:1480368:149471914947191495051333Sebaldella termitidis ATCC 33386, complete genomeVRR-NUC domain protein2e-1374.3
NC_021182:554000:568311568311568592282Clostridium pasteurianum BC1, complete genomeVRR-NUC domain-containing protein3e-1373.9
NC_015520:2974048:299589929958992996180282Mahella australiensis 50-1 BON chromosome, complete genomeVRR-NUC domain-containing protein2e-1271.6
NC_004668:295417:304826304826305146321Enterococcus faecalis V583, complete genomehypothetical protein3e-1270.5
NC_011898:3567761:360054236005423600802261Clostridium cellulolyticum H10, complete genomeVRR-NUC domain protein5e-1269.7
NC_014219:830966:856150856150856440291Bacillus selenitireducens MLS10 chromosome, complete genomeVRR-NUC domain protein7e-1269.3
NC_003909:386880:403562403562403843282Bacillus cereus ATCC 10987, complete genomephage protein, putative8e-1269.3
NC_011660:2541632:256714825671482567426279Listeria monocytogenes HCC23 chromosome, complete genomeVRR_NUC domain protein1e-1168.2
NC_010320:1268355:128090812809081281189282Thermoanaerobacter sp. X514 chromosome, complete genomehypothetical protein3e-1167.4
NC_007432:654904:671130671130671411282Streptococcus agalactiae A909, complete genomehypothetical protein3e-1167.4
NC_014328:303063:359324359324359605282Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephage-like protein3e-1167
NC_012985:1191125:119314911931491193445297Candidatus Liberibacter asiaticus str. psy62, complete genomehypothetical protein9e-1165.5
NC_015913:117966:127659127659127967309Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomehypothetical protein1e-1065.5
NC_016633:3069518:310611431061143106395282Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeVRR-NUC domain-containing protein1e-1065.5
NC_010337:2848360:289062228906222890903282Heliobacterium modesticaldum Ice1, complete genomehypothetical protein1e-1065.1
NC_017294:115500:126969126969127277309Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeVRR-NUC domain-containing protein1e-1064.7
NC_009633:4097536:413249441324944132778285Alkaliphilus metalliredigens QYMF chromosome, complete genomeVRR_NUC domain-containing protein2e-1064.7
NC_008530:1454118:146740114674011467712312Lactobacillus gasseri ATCC 33323, complete genomePhage associated protein2e-1064.3
NC_008021:1401249:140781014078101408103294Streptococcus pyogenes MGAS9429, complete genomehypothetical protein2e-1064.3
NC_014774:1210004:125392712539271254232306Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeVRR-NUC domain-containing protein3e-1063.9
NC_011898:3367457:340175734017573402038282Clostridium cellulolyticum H10, complete genomeVRR-NUC domain protein5e-1063.2
NC_009706:2673906:272845927284592728740282Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein5e-1063.2
NC_004606:446427:458395458395458670276Streptococcus pyogenes SSI-1, complete genomehypothetical protein7e-1062.8
NC_004070:1431146:143821514382151438490276Streptococcus pyogenes MGAS315, complete genomehypothetical protein7e-1062.8
NC_009332:1050353:105742210574221057697276Streptococcus pyogenes str. Manfredo chromosome, complete genomehypothetical protein7e-1062.8
NC_012471:2080902:209310520931052093380276Streptococcus equi subsp. equi 4047, complete genomephage protein7e-1062.8
NC_006086:35599:475494754947842294Streptococcus pyogenes MGAS10394, complete genomehypothetical protein7e-1062.8
NC_011375:749693:761827761827762120294Streptococcus pyogenes NZ131 chromosome, complete genomehypothetical protein6e-1062.8
NC_007297:1406796:141335714133571413632276Streptococcus pyogenes MGAS5005, complete genomehypothetical protein8e-1062.4
NC_008023:1426687:143170014317001431993294Streptococcus pyogenes MGAS2096, complete genomehypothetical protein7e-1062.4
NC_015697:468234:477411477411477857447Lactobacillus reuteri SD2112 chromosome, complete genomeVRR-NUC domain-containing protein1e-0962
NC_015697:506494:518405518405518851447Lactobacillus reuteri SD2112 chromosome, complete genomeVRR-NUC domain-containing protein3e-0960.8
NC_013941:3182576:319837331983733198642270Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage associated protein8e-0958.9
NC_017190:3166000:316784231678423168093252Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein1e-0858.9
NC_009253:1265474:127514512751451275426282Desulfotomaculum reducens MI-1 chromosome, complete genomehypothetical protein1e-0858.5
NC_015683:1296000:130884313088431309124282Corynebacterium ulcerans BR-AD22 chromosome, complete genomeputative protein p441e-0858.5
NC_017317:1291294:130521613052161305497282Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein1e-0858.5
NC_021064:1211480:121825912182591218537279Propionibacterium avidum 44067, complete genomehypothetical protein5e-0856.6
NC_015558:905227:914073914073914264192Streptococcus parauberis KCTC 11537 chromosome, complete genomehypothetical protein8e-0855.8
NC_021064:816000:821333821333821611279Propionibacterium avidum 44067, complete genomehypothetical protein9e-0855.5
NC_012985:1:576957696080312Candidatus Liberibacter asiaticus str. psy62, complete genomeVRR-NUC domain-containing protein6e-0752.8
NC_017297:2531750:255559625555962555784189Clostridium botulinum F str. 230613 chromosome, complete genomeVRR-NUC domain-containing protein4e-0650.1