Pre_GI: BLASTP Hits

Some Help

Query: NC_007778:3784104:3789946 Rhodopseudomonas palustris HaA2, complete genome

Start: 3789946, End: 3792522, Length: 2577

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013199:845000:8728418728418777064866Lactobacillus rhamnosus Lc 705, complete genomephage protein, measure1e-1172.4
NC_015520:55710:7031070310729732664Mahella australiensis 50-1 BON chromosome, complete genomephage tail tape measure protein, TP901 family1e-0965.9
NC_015520:3060495:3071393307139330735612169Mahella australiensis 50-1 BON chromosome, complete genomephage tail tape measure protein, TP901 family1e-0862.8
NC_012984:520000:5400725400725439773906Lactobacillus plantarum JDM1, complete genometape measure protein5e-0860.5
NC_006322:3418268:3440255344025534447214467Bacillus licheniformis ATCC 14580, complete genomehypothetical protein7e-0860.1
NC_015636:316994:3279043279043300872184Methanothermococcus okinawensis IH1 chromosome, complete genomephage tail tape measure protein, TP901 family2e-0758.9
NC_010465:2582080:2582080258208025849952916Yersinia pseudotuberculosis YPIII, complete genomephage tail tape measure protein, TP901 family2e-0758.5
NC_009633:2592000:2600654260065426030352382Alkaliphilus metalliredigens QYMF chromosome, complete genomeTP901 family phage tail tape measure protein3e-0757.8
NC_009697:2558286:2564800256480025701125313Clostridium botulinum A str. ATCC 19397 chromosome, completeTP901 family phage tail tape measure protein4e-0757.8
NC_010516:2676746:2683232268323226885925361Clostridium botulinum B1 str. Okra, complete genomephage related protein7e-0757
NC_014925:1314570:1322187132218713277755589Staphylococcus pseudintermedius HKU10-03 chromosome, completePhage tail length tape-measure protein9e-0756.2
NC_007613:1353500:1367514136751413703212808Shigella boydii Sb227, complete genomeputative tail protein9e-0756.2
NC_011772:2763863:2771523277152327754163894Bacillus cereus G9842, complete genomephage protein1e-0656.2
NC_014727:1220869:1231439123143912370275589Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,tape measure protein tmp2e-0655.5
NC_004722:1804788:1844978184497818486253648Bacillus cereus ATCC 14579, complete genomePhage protein2e-0655.5
NC_014328:3434478:3442433344243334446282196Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephage protein2e-0655.1
NC_012121:474144:4990024990025011072106Staphylococcus carnosus subsp. carnosus TM300, complete genometruncated phiSLT orf2067-like protein (fragment 1)2e-0655.1
NC_012779:3016327:3020718302071830235402823Edwardsiella ictaluri 93-146, complete genomephage tail tape measure protein, family, putative1e-0553.1