Pre_GI: BLASTN Hits

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Query: NC_007622:416000 Staphylococcus aureus RF122, complete genome

Start: 416000, End: 437099, Length: 21100

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a common strain associated with mastitis in cattle. This organism is responsible for several hundred million dollars worth of annual economic loss to animal production each year. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002758:47551647551649964424129Staphylococcus aureus subsp. aureus Mu50, complete genome04724BLASTN svgBLASTP svg
NC_002745:45000045000047241122412Staphylococcus aureus subsp. aureus N315, complete genome04724BLASTN svgBLASTP svg
NC_007793:45904545904548230823264Staphylococcus aureus subsp. aureus USA300, complete genome04922BLASTN svgBLASTP svg
NC_010079:45894045894048167922740Staphylococcus aureus subsp. aureus USA300_TCH1516, complete04922BLASTN svgBLASTP svg
NC_020164:892148921411523326020Staphylococcus warneri SG1, complete genome3e-98367BLASTN svgBLASTP svg