Pre_GI: BLASTN Hits

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Query: NC_007622:1751500 Staphylococcus aureus RF122, complete genome

Start: 1751500, End: 1773429, Length: 21930

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a common strain associated with mastitis in cattle. This organism is responsible for several hundred million dollars worth of annual economic loss to animal production each year. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002745:1804000*1804000182484520846Staphylococcus aureus subsp. aureus N315, complete genome013620BLASTN svgBLASTP svg
NC_003923:1841500*1841500186443222933Staphylococcus aureus subsp. aureus MW2, complete genome013350BLASTN svgBLASTP svg
NC_002953:1819411*1819411184209922689Staphylococcus aureus subsp. aureus MSSA476, complete genome013350BLASTN svgBLASTP svg
NC_002951:1848684*1848684187248723804Staphylococcus aureus subsp. aureus COL, complete genome013310BLASTN svgBLASTP svg
NC_010079:1871915*1871915189554823634Staphylococcus aureus subsp. aureus USA300_TCH1516, complete013300BLASTN svgBLASTP svg
NC_007795:1774725*1774725179848923765Staphylococcus aureus subsp. aureus NCTC 8325, complete genome013300BLASTN svgBLASTP svg
NC_007793:1871165*1871165189479823634Staphylococcus aureus subsp. aureus USA300, complete genome013300BLASTN svgBLASTP svg
NC_002758:1880323*1880323190322422902Staphylococcus aureus subsp. aureus Mu50, complete genome012590BLASTN svgBLASTP svg
NC_009782:1881722*1881722190409922378Staphylococcus aureus subsp. aureus Mu3, complete genome012590BLASTN svgBLASTP svg
NC_002952:1917999*1917999194186723869Staphylococcus aureus subsp. aureus MRSA252, complete genome011840BLASTN svgBLASTP svg
NC_004461:1465397*1465397149093125535Staphylococcus epidermidis ATCC 12228, complete genome01055BLASTN svgBLASTP svg
NC_002976:1361364*1361364138809126728Staphylococcus epidermidis RP62A, complete genome01047BLASTN svgBLASTP svg
NC_007168:1167454*1167454119908831635Staphylococcus haemolyticus JCSC1435, complete genome0837BLASTN svgBLASTP svg
NC_020164:1037979*1037979105773719759Staphylococcus warneri SG1, complete genome0716BLASTN svgBLASTP svg
NC_018704:896209*89620992081324605Amphibacillus xylanus NBRC 15112, complete genome1e-54222BLASTN svgBLASTP svg
NC_007929:473500*47350049963926140Lactobacillus salivarius subsp. salivarius UCC118, complete genome6e-41176BLASTN svgBLASTP svg
NC_012472:4515909*4515909454171025802Bacillus cereus 03BB102, complete genome8e-28133BLASTN svgBLASTP svg
NC_003909:4484278*4484278451179927522Bacillus cereus ATCC 10987, complete genome5e-26127BLASTN svgBLASTP svg
NC_008600:4509793*4509793453559925807Bacillus thuringiensis str. Al Hakam, complete genome2e-25125BLASTN svgBLASTP svg
NC_011772:4638000*4638000466192523926Bacillus cereus G9842, complete genome3e-24121BLASTN svgBLASTP svg
NC_006274:4563455*4563455458739323939Bacillus cereus E33L, complete genome1e-23119BLASTN svgBLASTP svg
NC_010184:4532262*4532262455888726626Bacillus weihenstephanensis KBAB4, complete genome2e-22115BLASTN svgBLASTP svg
NC_005957:4502733*4502733452941126679Bacillus thuringiensis serovar konkukian str. 97-27, complete3e-21111BLASTN svgBLASTP svg
NC_005945:4508304*4508304453209923796Bacillus anthracis str. Sterne, complete genome3e-21111BLASTN svgBLASTP svg
NC_004193:2342528*2342528236730224775Oceanobacillus iheyensis HTE831, complete genome3e-21111BLASTN svgBLASTP svg
NC_002951:2153571*2153571217716123591Staphylococcus aureus subsp. aureus COL, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_002953:2157781*2157781218009922319Staphylococcus aureus subsp. aureus MSSA476, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_003923:2178000*2178000220034322344Staphylococcus aureus subsp. aureus MW2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007793:2217872*2217872224096323092Staphylococcus aureus subsp. aureus USA300, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007795:2163706*2163706218609922394Staphylococcus aureus subsp. aureus NCTC 8325, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010079:2217767*2217767224135723591Staphylococcus aureus subsp. aureus USA300_TCH1516, complete3e-1591.7BLASTN svgBLASTP svg
NC_009782:2230000*2230000225234622347Staphylococcus aureus subsp. aureus Mu3, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_002758:2227874*2227874225013222259Staphylococcus aureus subsp. aureus Mu50, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_002745:2152000*2152000217427622277Staphylococcus aureus subsp. aureus N315, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_007622:1558753*1558753157743218680Staphylococcus aureus RF122, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009782:15103961510396155316542770Staphylococcus aureus subsp. aureus Mu3, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_002758:15089961508996155209943104Staphylococcus aureus subsp. aureus Mu50, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_002745:14325851432585147535342769Staphylococcus aureus subsp. aureus N315, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_005362:550823*55082357585325031Lactobacillus johnsonii NCC 533, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004193:3325612*3325612334809922488Oceanobacillus iheyensis HTE831, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007622:16000*160003563419635Staphylococcus aureus RF122, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012891:1949882*1949882196941919538Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,3e-0971.9BLASTN svgBLASTP svg
NC_008530:469802*46980249214622345Lactobacillus gasseri ATCC 33323, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007622:23993472399347242439425048Staphylococcus aureus RF122, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011999:15678181567818158634918532Macrococcus caseolyticus JCSC5402, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003923:14361391436139147709940961Staphylococcus aureus subsp. aureus MW2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002953:14646931464693150259937907Staphylococcus aureus subsp. aureus MSSA476, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009922:2766397*2766397278959923203Alkaliphilus oremlandii OhILAs, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_000963:506500*50650052532718828Rickettsia prowazekii str. Madrid E, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002952:2256000*2256000227809922100Staphylococcus aureus subsp. aureus MRSA252, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007622:2117188*2117188213617218985Staphylococcus aureus RF122, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015975:1493636*1493636151659922964Lactobacillus ruminis ATCC 27782 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015214:1700000*1700000172159921600Lactobacillus acidophilus 30SC chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014724:1731238*1731238175280921572Lactobacillus amylovorus GRL 1112 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008525:664500*66450068827523776Pediococcus pentosaceus ATCC 25745, complete genome3e-0661.9BLASTN svgBLASTP svg