Pre_GI: BLASTP Hits

Some Help

Query: NC_007613:4119771:4126353 Shigella boydii Sb227, complete genome

Start: 4126353, End: 4127066, Length: 714

Host Lineage: Shigella boydii; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic that took place in China in the 1950s. Causes dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella boydii is uncommon except in India, where it was first isolated. Progression to clinical dysentery occurs in most patients infected with this organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010658:4257310:426778642677864268499714Shigella boydii CDC 3083-94, complete genomeclass B acid phosphatase2e-123441
NC_004631:4300457:430045743004574301170714Salmonella enterica subsp. enterica serovar Typhi Ty2, completeclass B acid phosphatase precursor5e-115413
NC_006511:4225455:422545542254554226168714Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCclass B acid phosphatase precursor5e-115413
NC_003198:4315807:431580743158074316520714Salmonella enterica subsp. enterica serovar Typhi str. CT18,class B acid phosphatase precursor5e-115413
NC_011094:4361238:436123843612384361951714Salmonella enterica subsp. enterica serovar Schwarzengrund stracid phosphatase/phosphotransferase5e-115413
NC_011147:4221000:422114242211424221855714Salmonella enterica subsp. enterica serovar Paratyphi A stracid phosphatase/phosphotransferase5e-115413
NC_016832:4288980:428898042889804289693714Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Class B acid phosphatase5e-115413
NC_011205:4486142:448614244861424486855714Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853acid phosphatase/phosphotransferase4e-114410
NC_003197:4470683:447068344706834471396714Salmonella typhimurium LT2, complete genomenon-specific acid phosphatase/phosphotransferase4e-114410
NC_011080:4461851:446185144618514462564714Salmonella enterica subsp. enterica serovar Newport str. SL254,had superfamily (subfamily iiib) phosphatase4e-114410
NC_010102:4396500:439663943966394397352714Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-114410
NC_006905:4405301:440530144053014406014714Salmonella enterica subsp. enterica serovar Choleraesuis strnon-specific acid phosphatase/phosphotransferase, class B4e-114410
NC_011149:4390315:439031543903154391028714Salmonella enterica subsp. enterica serovar Agona str. SL483,had superfamily (subfamily iiib) phosphatase4e-114410
NC_010067:3310336:335748533574853358198714Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-114410
NC_011274:4305812:430581243058124306525714Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91acid phosphatase/phosphotransferase4e-114410
NC_011294:4327904:432790443279044328617714Salmonella enterica subsp. enterica serovar Enteritidis stracid phosphatase/phosphotransferase4e-114410
NC_012125:4400636:440063644006364401349714Salmonella enterica subsp. enterica serovar Paratyphi C strainacid phosphatase/phosphotransferase4e-114410
NC_016810:4491975:449197544919754492688714Salmonella enterica subsp. enterica serovar Typhimurium strclass B acid phosphatase4e-114410
NC_016856:4482845:448422544842254484938714Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sacid phosphatase/phosphotransferase4e-114410
NC_016857:4491976:449197644919764492689714Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74acid phosphatase/phosphotransferase4e-114410
NC_016860:4575772:457577245757724576485714Salmonella enterica subsp. enterica serovar Typhimurium stracid phosphatase/phosphotransferase4e-114410
NC_016863:4431831:443183144318314432544714Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1acid phosphatase/phosphotransferase4e-114410
NC_017046:4490500:449063644906364491349714Salmonella enterica subsp. enterica serovar Typhimurium str. 798class B acid phosphatase precursor4e-114410
NC_011083:4466634:446663444666344467347714Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,had superfamily (subfamily iiib) phosphatase7e-114409
NC_015761:4098481:409848140984814099194714Salmonella bongori NCTC 12419, complete genomeclass B acid phosphatase4e-113407
NC_016831:4286000:428616242861624286875714Salmonella enterica subsp. enterica serovar Gallinarum/pullorumclass B acid phosphatase precursor1e-112405
NC_020181:3585898:361834136183413619054714Enterobacter aerogenes EA1509E, complete genomeNMN phosphatase ; Class B acid phosphatase precursor1e-103375
NC_015663:549425:557964557964558680717Enterobacter aerogenes KCTC 2190 chromosome, complete genomeacid phosphatase/phosphotransferase8e-57220
NC_020181:4800298:482434748243474825063717Enterobacter aerogenes EA1509E, complete genomeNMN phosphatase ; Class B acid phosphatase precursor2e-56218
NC_007432:654904:704649704649705386738Streptococcus agalactiae A909, complete genomeHAD-superfamily phosphatase, subfamily IIIB6e-38157
NC_013192:305478:307037307037307759723Leptotrichia buccalis DSM 1135, complete genomeHAD superfamily (subfamily IIIB) phosphatase, TIGR016727e-37154