Pre_GI: BLASTP Hits

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Query: NC_007613:4119771:4119771 Shigella boydii Sb227, complete genome

Start: 4119771, End: 4120643, Length: 873

Host Lineage: Shigella boydii; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic that took place in China in the 1950s. Causes dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella boydii is uncommon except in India, where it was first isolated. Progression to clinical dysentery occurs in most patients infected with this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015224:4101939:411678041167804117646867Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4-hydroxybenzoate octaprenyltransferase5e-89327
NC_010688:449649:451855451855452760906Xanthomonas campestris pv. campestris, complete genome4-hydroxybenzoate octaprenyltransferase8e-66250
NC_005955:427142:4285084285084295121005Bartonella quintana str. Toulouse, complete genome4-hydroxybenzoate octaprenyltransferase1e-34146
NC_002754:105256:105256105256106164909Sulfolobus solfataricus P2, complete genome4-hydroxybenzoate octaprenyltransferase2e-1583.6
NC_003902:461808:464014464014464919906Xanthomonas campestris pv. campestris str. ATCC 33913, complete4-hydroxybenzoate octaprenyltransferase8e-66250
NC_002488:45219:6139561395623961002Xylella fastidiosa 9a5c, complete genome4-hydroxybenzoate octaprenyltransferase3e-62238
NC_020209:4643901:466194846619484662838891Pseudomonas poae RE*1-1-14, complete genome4-hydroxybenzoate octaprenyltransferase5e-61234
NC_013016:656000:6760246760246770491026Neisseria meningitidis alpha14 chromosome, complete genome4-hydroxybenzoate octaprenyltransferase1e-54213
NC_010513:44886:605996059961498900Xylella fastidiosa M12 chromosome, complete genome4-hydroxybenzoate octaprenyltransferase4e-64244
NC_015947:4248536:425014942501494251042894Burkholderia sp. JV3 chromosome, complete genome4-hydroxybenzoate octaprenyltransferase5e-61234
NC_013009:721823:734664734664735506843Neorickettsia risticii str. Illinois, complete genome4-hydroxybenzoate octaprenyltransferase4e-22105
NC_003919:457482:460839460839461744906Xanthomonas axonopodis pv. citri str. 306, complete genome4-hydroxybenzoate octaprenyltransferase3e-66251
NC_007086:459934:464606464606465511906Xanthomonas campestris pv. campestris str. 8004, complete genome4-hydroxybenzoate octaprenyltransferase8e-66250
NC_003112:744476:766063766063766953891Neisseria meningitidis MC58, complete genome4-hydroxybenzoate octaprenyltransferase1e-56220
NC_009465:29735:814778147782346870Candidatus Vesicomyosocius okutanii HA, complete genome4-hydroxybenzoate octaprenyltransferase4e-55214
NC_014355:880856:882704882704883549846Candidatus Nitrospira defluvii, complete genome4-hydroxybenzoate octaprenyltransferase6e-43174
NC_007798:703922:716757716757717599843Neorickettsia sennetsu str. Miyayama, complete genome4-hydroxybenzoate octaprenyltransferase9e-23107
NC_003106:2197638:221353522135352214428894Sulfolobus tokodaii str. 7, complete genome4-hydroxybenzoate octaprenyltransferase3e-1479.3
NC_014924:3270547:327300432730043273906903Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome4-hydroxybenzoate polyprenyl transferase3e-62238
NC_012856:2633890:263389026338902634765876Ralstonia pickettii 12D chromosome 1, complete genome4-hydroxybenzoate polyprenyl transferase8e-58223
NC_010658:4257310:426042742604274261299873Shigella boydii CDC 3083-94, complete genome4-hydroxybenzoate polyprenyl transferase9e-140496
NC_010682:3033646:303458130345813035423843Ralstonia pickettii 12J chromosome 1, complete sequence4-hydroxybenzoate polyprenyl transferase6e-55214
NC_015318:1455444:147645614764561477310855Hippea maritima DSM 10411 chromosome, complete genome4-hydroxybenzoate polyprenyltransferase3e-0962.8
NC_015850:510837:534881534881535741861Acidithiobacillus caldus SM-1 chromosome, complete genome4-hydroxybenzoate polyprenyltransferase8e-54210
NC_013741:1068170:106817010681701069003834Archaeoglobus profundus DSM 5631, complete genome4-hydroxybenzoate polyprenyltransferase1e-1273.9
NC_017516:1535904:153833715383371539227891Neisseria meningitidis H44/76 chromosome, complete genome4-hydroxybenzoate polyprenyltransferase2e-55216
NC_015682:205900:209396209396210274879Thermodesulfobacterium sp. OPB45 chromosome, complete genome4-hydroxybenzoate polyprenyltransferase4e-1375.5
NC_010730:1519458:153626415362641537121858Sulfurihydrogenibium sp. YO3AOP1, complete genome4-hydroxybenzoate polyprenyltransferase4e-1272
NC_008818:1483483:149803714980371498969933Hyperthermus butylicus DSM 5456, complete genome4-hydroxybenzoate polyprenyltransferase2e-0963.2
NC_013512:126915:146000146000146869870Sulfurospirillum deleyianum DSM 6946, complete genome4-hydroxybenzoate polyprenyltransferase6e-0858.5
NC_017271:4410500:442751344275134428418906Xanthomonas campestris pv. raphani 756C chromosome, complete4-hydroxybenzoate polyprenyltransferase8e-66250
NC_017518:828662:843578843578844468891Neisseria meningitidis NZ-05/33 chromosome, complete genome4-hydroxybenzoate polyprenyltransferase1e-56219
NC_015437:918614:937821937821938669849Selenomonas sputigena ATCC 35185 chromosome, complete genome4-hydroxybenzoate polyprenyltransferase9e-1477.8
NC_014377:1298806:130525813052581306154897Thermosediminibacter oceani DSM 16646 chromosome, complete genome4-hydroxybenzoate polyprenyltransferase4e-1065.5
NC_014221:2392150:240489724048972405763867Truepera radiovictrix DSM 17093 chromosome, complete genome4-hydroxybenzoate polyprenyltransferase4e-0962
NC_013939:295220:319765319765320616852Deferribacter desulfuricans SSM1, complete genome4-hydroxybenzoate polyprenyltransferase2e-1273.6
NC_008609:251608:286648286648287532885Pelobacter propionicus DSM 2379, complete genome4-hydroxybenzoate polyprenyltransferase, putative3e-0962.8
NC_004344:129798:145749145749146570822Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein2e-38159
NC_016893:694587:696967696967697788822Wigglesworthia glossinidia endosymbiont of Glossina morsitansp-hydroxybenzoate octaprenyltransferase9e-41167
NC_016111:3659269:366405136640513664974924Streptomyces cattleya NRRL 8057, complete genomePrenyltransferase3e-1169.3
NC_009482:619467:620312620312621211900Synechococcus sp. RCC307 chromosome, complete genomeprenyltransferase3e-1789
NC_010943:4527366:452916645291664530059894Stenotrophomonas maltophilia K279a, complete genomeputative 4-hydroxybenzoate octaprenyl transferase4e-62238
NC_017505:751836:7698317698317708561026Neisseria meningitidis alpha710 chromosome, complete genomeputative 4-hydroxybenzoate octaprenyltransferase4e-55215
NC_012526:157000:166824166824167708885Deinococcus deserti VCD115, complete genomeputative 4-hydroxybenzoate polyprenyltransferase,(4-HB2e-1273.6