Pre_GI: BLASTP Hits

Some Help

Query: NC_007607:87000:122432 Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence

Start: 122432, End: 123628, Length: 1197

Host Lineage: Shigella dysenteriae; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. Causes bacillary dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella dysenteriae is the major cause of Shigella-related deaths in developing nations, mostly in young children.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010660:86445:9314693146943421197Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencetransposase0678
NC_010658:1772994:1785651178565117868471197Shigella boydii CDC 3083-94, complete genometransposase0675
NC_008258:1934479:1935527193552719367231197Shigella flexneri 5 str. 8401, complete genomeISSfl2 ORF0673
NC_008253:3941938:3987475398747539886711197Escherichia coli 536, complete genomeputative transposase0662
NC_008060:2913671:2927028292702829282901263Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetransposase IS116/IS110/IS9026e-149527
NC_007434:1322500:1349622134962213509381317Burkholderia pseudomallei 1710b chromosome I, complete sequenceTransposase3e-148525
NC_007952:3196085:3195026319502631962311206Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative transposase1e-147523
NC_010084:1299387:1306852130685213080571206Burkholderia multivorans ATCC 17616 chromosome 1, completetransposase IS116/IS110/IS902 family protein3e-147521
NC_010801:550270:5818125818125830171206Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu10 transposase3e-147521
NC_010087:319063:3418413418413430461206Burkholderia multivorans ATCC 17616 chromosome 3, completetransposase IS116/IS110/IS902 family protein3e-147521
NC_010804:2206000:2216716221671622179211206Burkholderia multivorans ATCC 17616 chromosome 1, completeISBmu10 transposase3e-147521
NC_008537:12500:1657316573178381266Arthrobacter sp. FB24 plasmid 1, complete sequencetransposase, IS111A/IS1328/IS15336e-137487
NC_015145:3657103:3677666367766636788651200Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometransposase2e-136486
NC_012803:1302261:1311276131127613125021227Micrococcus luteus NCTC 2665, complete genometransposase3e-118425
NC_014391:4617688:4619787461978746210101224Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS116/IS110/IS902 family protein8e-111400
NC_016111:1904859:1908978190897819102791302Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-110399
NC_009142:2725000:2743012274301227442291218Saccharopolyspora erythraea NRRL 2338, complete genometransposase IS116/IS110/IS902 family protein7e-107387
NC_008271:119957:1199571199571211321176Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable transposase3e-104379
NC_014218:1163513:1178727117872711799261200Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-99362
NC_013929:1584906:1597557159755715987591203Streptomyces scabiei 87.22 chromosome, complete genometransposase3e-98358
NC_003888:7028165:7057809705780970590261218Streptomyces coelicolor A3(2), complete genomeIS110 transposase/integrase2e-97356
NC_003888:8594500:8609130860913086103471218Streptomyces coelicolor A3(2), complete genomeprobable IS110 transposase2e-97356
NC_013131:3473843:3476181347618134773801200Catenulispora acidiphila DSM 44928, complete genometransposase IS116/IS110/IS902 family protein7e-97354
NC_007164:622000:6289516289516301621212Corynebacterium jeikeium K411, complete genometransposase for IS3510d5e-84311
NC_015673:2206881:2212642221264222138561215Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element6e-75281
NC_016800:694750:699944699944700891948Corynebacterium diphtheriae BH8 chromosome, complete genometransposase-like protein1e-58227
NC_007951:1928906:194963619496361950214579Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-58226
NC_015673:397947:402560402560403480921Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element3e-56219
NC_016822:1839739:184459618445961845048453Shigella sonnei 53G, complete genomeISSfl2 ORF2e-55216
NC_007164:1839154:1859120185912018603281209Corynebacterium jeikeium K411, complete genometransposase for IS3512c9e-51201
NC_007384:1763375:177004517700451770461417Shigella sonnei Ss046, complete genomeISSfl2 ORF2e-50200
NC_015673:525638:5298365298365310441209Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element4e-49195
NC_016799:731849:7454017454017466091209Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein6e-48191
NC_016787:733685:7510667510667522741209Corynebacterium diphtheriae HC03 chromosome, complete genometransposase-like protein2e-47189
NC_016782:152764:164359164359164934576Corynebacterium diphtheriae 241 chromosome, complete genometransposase-like protein3e-43176
NC_008703:31500:4552345523467281206Mycobacterium sp. KMS plasmid pMKMS01, complete sequencetransposase IS116/IS110/IS902 family protein2e-39163
NC_014811:166389:1674631674631686681206Mycobacterium sp. Spyr1 plasmid pMSPYR101, complete sequencetransposase2e-39163
NC_008703:31500:3294732947341521206Mycobacterium sp. KMS plasmid pMKMS01, complete sequencetransposase IS116/IS110/IS902 family protein2e-39163
NC_016822:1839739:184756818475681847852285Shigella sonnei 53G, complete genomeISSfl2 ORF5e-38159
NC_007384:1763375:176958217695821769866285Shigella sonnei Ss046, complete genomeISSfl2 ORF5e-38159
NC_009142:5647737:564935756493575649965609Saccharopolyspora erythraea NRRL 2338, complete genomeputative IS110 transposase/integrase1e-37157
NC_002944:1881405:1882374188237418835941221Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-36153
NC_002944:2373873:2388971238897123901911221Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-36153
NC_016789:1295918:1323662132366213247321071Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein4e-36152
NC_016111:2952338:2959354295935429605501197Streptomyces cattleya NRRL 8057, complete genomehypothetical protein5e-35148
NC_010612:4654936:4671921467192146731261206Mycobacterium marinum M, complete genometransposase7e-34145
NC_015312:61752:7224072240734421203Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS116/IS110/IS902 family protein8e-34144
NC_013441:2788806:2820958282095828221811224Gordonia bronchialis DSM 43247, complete genometransposase IS111A/IS1328/IS15336e-33142
NC_006087:2326143:2327614232761423288161203Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, undefined3e-33142
NC_002944:4163490:4183576418357641847841209Mycobacterium avium subsp. paratuberculosis K-10, complete genomeIS1110 transposase4e-32139
NC_016582:10326938:1033242710332427103336231197Streptomyces bingchenggensis BCW-1 chromosome, complete genomeIS116/IS110/IS902 family transposase8e-32138
NC_019673:2051363:2139699213969921409161218Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-31136
NC_015145:2693749:2712406271240627136081203Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometransposase4e-30132
NC_016789:224697:230652230652231308657Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein5e-30132
NC_008537:12500:2948329483306761194Arthrobacter sp. FB24 plasmid 1, complete sequencetransposase IS116/IS110/IS902 family protein2e-29130
NC_012586:425615:4426694426694438471179Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative transposase for insertion sequence NGRIS-14a1e-28127
NC_015312:1265797:1280848128084812820591212Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15332e-28127
NC_010572:802269:816655816655817128474Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative IS element transposase3e-27123
NC_014666:1844882:1861075186107518622711197Frankia sp. EuI1c chromosome, complete genometransposase IS116/IS110/IS902 family protein8e-27121
NC_014666:1601972:1613788161378816149841197Frankia sp. EuI1c chromosome, complete genometransposase IS116/IS110/IS902 family protein8e-27121
NC_016789:199503:220068220068220781714Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein9e-27121
NC_007164:1434305:144673014467301447089360Corynebacterium jeikeium K411, complete genometransposase for IS3510f9e-26118
NC_008543:2696377:270755627075562707891336Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetransposase IS116/IS110/IS902 family protein7e-24112
NC_008061:2548849:255909725590972559432336Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetransposase IS116/IS110/IS9021e-23111
NC_014158:233733:2820262820262832401215Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-23110
NC_003155:210240:2435812435812447711191Streptomyces avermitilis MA-4680, complete genomeIS110 family transposase6e-23108
NC_016799:731849:747589747589748074486Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein1e-21104
NC_013929:3722867:3749514374951437506591146Streptomyces scabiei 87.22 chromosome, complete genometransposase3e-1996.3
NC_018583:95388:985769857699028453Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTransposase-like protein3e-1893.6
NC_016785:161498:181883181883182143261Corynebacterium diphtheriae CDCE 8392 chromosome, complete genometransposase-like protein2e-1893.6
NC_016785:161498:181021181021181488468Corynebacterium diphtheriae CDCE 8392 chromosome, complete genometransposase-like protein1e-1688.2
NC_016790:1758000:177147317714731772090618Corynebacterium diphtheriae VA01 chromosome, complete genometransposase-like protein2e-1687.4
NC_016788:1785287:179910017991001799717618Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein2e-1687.4
NC_016822:1839739:184809118480911848417327Shigella sonnei 53G, complete genomeISSfl2 ORF2e-1687.4
NC_016787:1782951:179752217975221797899378Corynebacterium diphtheriae HC03 chromosome, complete genometransposase-like protein5e-1685.9
NC_016799:731849:748118748118748507390Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein6e-1479
NC_016802:1815098:183281618328161833145330Corynebacterium diphtheriae HC02 chromosome, complete genometransposase-like protein5e-1479
NC_012522:7871173:789676878967687897541774Rhodococcus opacus B4, complete genomeputative transposase4e-1376.3
NC_016790:1758000:177197217719721772301330Corynebacterium diphtheriae VA01 chromosome, complete genometransposase-like protein4e-1376.3
NC_016788:1785287:179959917995991799928330Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein4e-1376.3
NC_015312:6398931:6398931639893164001631233Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15334e-1273.2
NC_016782:152764:163909163909164331423Corynebacterium diphtheriae 241 chromosome, complete genometransposase-like protein4e-1272.8
NC_015312:1191633:1214360121436012155921233Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15337e-1272
NC_015573:813000:8374418374418386491209Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS111A/IS1328/IS15332e-1170.5
NC_015573:2187688:2193348219334821945561209Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS111A/IS1328/IS15332e-1170.5
NC_010572:8352462:836914583691458369900756Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase3e-1066.6
NC_008253:3122148:312997331299733130362390Escherichia coli 536, complete genomehypothetical protein2e-0963.5
NC_014120:88679:911169111691301186Burkholderia sp. CCGE1002 plasmid pBC201, complete sequencetransposase IS116/IS110/IS902 family protein4e-0962.8
NC_009007:57804:671496714967832684Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence8e-0962
NC_014391:6710500:6733615673361567348501236Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-0860.8
NC_016789:199503:219727219727219939213Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein5e-0859.3
NC_016048:987699:1005958100595810072051248Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element1e-0758.2
NC_016048:456732:4597954597954609701176Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element1e-0757.8
NC_008726:6335961:6358190635819063594011212Mycobacterium vanbaalenii PYR-1, complete genometransposase, IS111A/IS1328/IS15331e-0757.8
NC_013921:1915377:1935060193506019363431284Thermoanaerobacter italicus Ab9 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-0757.4
NC_015312:4658548:4671793467179346731391347Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15333e-0757
NC_009077:1725683:176727217672721767604333Mycobacterium sp. JLS, complete genome2e-0757
NC_015859:1536439:155599215559921556978987Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element3e-0756.6
NC_016800:694750:714651714651714890240Corynebacterium diphtheriae BH8 chromosome, complete genometransposase-like protein1e-0654.7
NC_016788:655175:676817676817677056240Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein1e-0654.7
NC_016582:10159486:102085631020856310209084522Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transposase2e-0654.3
NC_016789:224697:230091230091230393303Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein2e-0653.9
NC_009254:442360:451923451923452051129Burkholderia vietnamiensis G4 chromosome 3, complete sequence2e-0653.9
NC_013131:9903320:9916715991671599179411227Catenulispora acidiphila DSM 44928, complete genometransposase IS111A/IS1328/IS15335e-0652.8
NC_008596:4152916:4155111415511141563221212Mycobacterium smegmatis str. MC2 155, complete genomeTransposase IS116/IS110/IS902 family protein6e-0652.4
NC_008596:3404832:3417007341700734182181212Mycobacterium smegmatis str. MC2 155, complete genomeTransposase IS116/IS110/IS902 family protein6e-0652.4
NC_008596:4043213:4053599405359940548101212Mycobacterium smegmatis str. MC2 155, complete genomeTransposase IS116/IS110/IS902 family protein7e-0652
NC_009012:2953638:2953638295363829549271290Clostridium thermocellum ATCC 27405, complete genometransposase IS116/IS110/IS9028e-0652
NC_009012:1857845:1878759187875918800481290Clostridium thermocellum ATCC 27405, complete genometransposase IS116/IS110/IS9029e-0651.6