Pre_GI: BLASTP Hits

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Query: NC_007606:4182188:4187233 Shigella dysenteriae Sd197, complete genome

Start: 4187233, End: 4187550, Length: 318

Host Lineage: Shigella dysenteriae; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. Causes bacillary dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella dysenteriae is the major cause of Shigella-related deaths in developing nations, mostly in young children.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:2444972:246747124674712467980510Escherichia coli CFT073, complete genomeTransposase3e-45179
NC_004431:3012668:302638830263883026897510Escherichia coli CFT073, complete genomehypothetical protein3e-45179
NC_011601:1466496:148080714808071481265459Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase of IS200C5e-45179
NC_017154:1225500:123619712361971236706510Yersinia pestis D106004 chromosome, complete genometransposase6e-44176
NC_017160:1507500:151490515149051515414510Yersinia pestis D182038 chromosome, complete genometransposase6e-44176
NC_017265:1136000:114623711462371146746510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase6e-44176
NC_017265:2940539:294648129464812946990510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase6e-44176
NC_017265:3724500:373052537305253731034510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase6e-44176
NC_003197:4551880:455941645594164559874459Salmonella typhimurium LT2, complete genometransposase for IS2005e-44176
NC_010102:4557037:457204745720474572505459Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-44176
NC_010102:3955479:395761639576163958074459Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-44176
NC_011083:1323827:133017113301711330629459Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transposase for5e-44176
NC_014029:1283500:129410412941041294613510Yersinia pestis Z176003 chromosome, complete genometransposase6e-44176
NC_009708:2245586:226898822689882269497510Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeIS1541, transposase6e-44176
NC_010159:259695:265687265687266196510Yersinia pestis Angola, complete genomeIS1541, transposase6e-44176
NC_010159:1417993:141799314179931418502510Yersinia pestis Angola, complete genomeIS1541, transposase6e-44176
NC_005810:3333000:334880033488003349309510Yersinia pestis biovar Microtus str. 91001, complete genometransposase for the IS1541 insertion element6e-44176
NC_004088:3382148:338941033894103389919510Yersinia pestis KIM, complete genometransposase6e-44176
NC_010159:2440947:244744324474432447952510Yersinia pestis Angola, complete genomeIS1541, transposase6e-44176
NC_010159:809663:829408829408829917510Yersinia pestis Angola, complete genomeIS1541, transposase6e-44176
NC_005810:1130251:113751311375131138022510Yersinia pestis biovar Microtus str. 91001, complete genometransposase for the IS1541 insertion element6e-44176
NC_010159:1668795:167420516742051674714510Yersinia pestis Angola, complete genomeIS1541, transposase6e-44176
NC_010159:2252380:227011922701192270628510Yersinia pestis Angola, complete genomeIS1541, transposase6e-44176
NC_004088:3859173:386516538651653865674510Yersinia pestis KIM, complete genometransposase6e-44176
NC_010102:1779707:179665017966501797108459Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-44176
NC_003198:1771432:179135717913571791815459Salmonella enterica subsp. enterica serovar Typhi str. CT18,transposase for insertion sequence element IS2005e-44176
NC_004631:1182883:118931711893171189775459Salmonella enterica subsp. enterica serovar Typhi Ty2, completetransposase for insertion sequence element IS2005e-44176
NC_017154:2876545:288787228878722888381510Yersinia pestis D106004 chromosome, complete genometransposase4e-44176
NC_017154:734875:750565750565751074510Yersinia pestis D106004 chromosome, complete genometransposase4e-44176
NC_017154:734875:751276751276751785510Yersinia pestis D106004 chromosome, complete genometransposase4e-44176
NC_017160:2414000:242307424230742423583510Yersinia pestis D182038 chromosome, complete genometransposase4e-44176
NC_017160:3094768:310301731030173103526510Yersinia pestis D182038 chromosome, complete genometransposase4e-44176
NC_017160:737000:753454753454753963510Yersinia pestis D182038 chromosome, complete genometransposase4e-44176
NC_017265:2940539:295312529531252953634510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase4e-44176
NC_017265:3375463:337546333754633375972510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase4e-44176
NC_017265:3375463:338369433836943384203510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase4e-44176
NC_014029:792719:809113809113809622510Yersinia pestis Z176003 chromosome, complete genometransposase4e-44176
NC_014029:792719:808402808402808911510Yersinia pestis Z176003 chromosome, complete genometransposase4e-44176
NC_014029:3171627:317805031780503178559510Yersinia pestis Z176003 chromosome, complete genometransposase4e-44176
NC_010102:2322866:234942723494272349885459Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-44176
NC_003198:2453074:247597624759762476434459Salmonella enterica subsp. enterica serovar Typhi str. CT18,transposase for insertion sequence element IS2005e-44176
NC_016860:4649274:465681046568104657268459Salmonella enterica subsp. enterica serovar Typhimurium strIS200 transposase5e-44176
NC_004431:2185750:223146722314672231844378Escherichia coli CFT073, complete genomehypothetical protein5e-44176
NC_016832:1182496:118823811882381188747510Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transposase for insertion sequence element IS2004e-44176
NC_004088:1265730:128356212835621284071510Yersinia pestis KIM, complete genometransposase4e-44176
NC_005810:3021913:303363330336333034142510Yersinia pestis biovar Microtus str. 91001, complete genometransposase for the IS1541 insertion element4e-44176
NC_004088:1510467:151689015168901517399510Yersinia pestis KIM, complete genometransposase4e-44176
NC_010159:409500:421360421360421869510Yersinia pestis Angola, complete genomeIS1541, transposase4e-44176
NC_008149:3373229:340595834059583406392435Yersinia pestis Nepal516, complete genometransposase7e-44175
NC_017168:341233:347225347225347683459Yersinia pestis A1122 chromosome, complete genomeIS1541 transposase7e-44175
NC_009381:522731:538470538470538928459Yersinia pestis Pestoides F chromosome, complete genometransposase for the IS1541 insertion element7e-44175
NC_009381:2939782:294709529470952947553459Yersinia pestis Pestoides F chromosome, complete genometransposase for the IS1541 insertion element7e-44175
NC_008149:3251196:325850932585093258967459Yersinia pestis Nepal516, complete genometransposase for the IS1541 insertion element7e-44175
NC_008150:3430000:343604734360473436505459Yersinia pestis Antiqua, complete genometransposase for the IS1541 insertion element7e-44175
NC_008149:650706:666446666446666904459Yersinia pestis Nepal516, complete genometransposase for the IS1541 insertion element7e-44175
NC_008150:650899:661643661643662101459Yersinia pestis Antiqua, complete genometransposase for the IS1541 insertion element7e-44175
NC_003143:1233128:124490712449071245365459Yersinia pestis CO92, complete genometransposase for the IS1541 insertion element7e-44175
NC_003143:741169:757619757619758077459Yersinia pestis CO92, complete genometransposase for the IS1541 insertion element7e-44175
NC_010159:1417993:142905914290591429436378Yersinia pestis Angola, complete genome8e-44175
NC_004088:3505383:353812035381203538554435Yersinia pestis KIM, complete genometransposase7e-44175
NC_004088:2366000:236765023676502368078429Yersinia pestis KIM, complete genometransposase6e-44175
NC_017168:561402:583604583604584062459Yersinia pestis A1122 chromosome, complete genometransposase6e-44175
NC_017168:4155143:416692341669234167381459Yersinia pestis A1122 chromosome, complete genometransposase6e-44175
NC_017168:341233:347935347935348393459Yersinia pestis A1122 chromosome, complete genometransposase6e-44175
NC_017168:2535732:254711425471142547572459Yersinia pestis A1122 chromosome, complete genometransposase6e-44175
NC_009381:2491427:250284725028472503305459Yersinia pestis Pestoides F chromosome, complete genometransposase for the IS1541 insertion element6e-44175
NC_010465:3465351:346786634678663468324459Yersinia pseudotuberculosis YPIII, complete genometransposase IS200-family protein6e-44175
NC_008149:1440371:144686114468611447319459Yersinia pestis Nepal516, complete genometransposase for the IS1541 insertion element6e-44175
NC_003143:3191246:320262832026283203086459Yersinia pestis CO92, complete genometransposase for the IS1541 insertion element6e-44175
NC_003143:741169:756909756909757367459Yersinia pestis CO92, complete genometransposase for the IS1541 insertion element6e-44175
NC_008150:3711953:372682137268213727279459Yersinia pestis Antiqua, complete genometransposase for the IS1541 insertion element6e-44175
NC_008149:1195614:121349712134971213955459Yersinia pestis Nepal516, complete genometransposase for the IS1541 insertion element6e-44175
NC_010159:1071937:107327110732711073783513Yersinia pestis Angola, complete genometransposase4e-43173
NC_010159:741819:749624749624750133510Yersinia pestis Angola, complete genomeIS1541, transposase3e-43173
NC_004631:1881214:189501818950181895476459Salmonella enterica subsp. enterica serovar Typhi Ty2, completetransposase for insertion sequence element IS2006e-43172
NC_004631:1881214:189823018982301898688459Salmonella enterica subsp. enterica serovar Typhi Ty2, completetransposase for insertion sequence element IS2006e-43172
NC_003198:1078113:108212510821251082583459Salmonella enterica subsp. enterica serovar Typhi str. CT18,transposase for insertion sequence element IS2006e-43172
NC_003198:1078113:108533710853371085795459Salmonella enterica subsp. enterica serovar Typhi str. CT18,transposase for insertion sequence element is2006e-43172
NC_016832:1880174:189186818918681892377510Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transposase for insertion sequence element IS2005e-43172
NC_016832:1880174:189508018950801895589510Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transposase for insertion sequence element IS2005e-43172
NC_014500:3023762:304655730465573047015459Dickeya dadantii 3937 chromosome, complete genomeISEch5 transposase6e-42169
NC_014500:2589089:259937725993772599688312Dickeya dadantii 3937 chromosome, complete genometransposase6e-42169
NC_008800:1090000:112208011220801122538459Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,transposase for IS15415e-42169
NC_008800:1870596:188860518886051889063459Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,transposase for IS15415e-42169
NC_016818:4215836:422709442270944227552459Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetransposase1e-41168
NC_016818:2542295:254559125455912546049459Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetransposase1e-41168
NC_013716:1178383:118929111892911189626336Citrobacter rodentium ICC168, complete genome7e-40162
NC_013421:2720500:273015727301572730615459Pectobacterium wasabiae WPP163, complete genometransposase IS200-family protein5e-36149
NC_008150:2574794:258619625861962586369174Yersinia pestis Antiqua, complete genometransposase for the IS1541 insertion element6e-25112
NC_014393:139690:152392152392152865474Clostridium cellulovorans 743B chromosome, complete genometransposase IS200-family protein2e-24111
NC_014393:503230:515903515903516376474Clostridium cellulovorans 743B chromosome, complete genometransposase IS200-family protein2e-24111
NC_014824:366000:376309376309376785477Ruminococcus albus 7 plasmid pRUMAL01, complete sequencetransposase IS200-family protein3e-24110
NC_006448:1604627:161581716158171616290474Streptococcus thermophilus LMG 18311, complete genomeIS657, transposase, IS200 family8e-24108
NC_006449:1606948:161812916181291618602474Streptococcus thermophilus CNRZ1066, complete genomeIS657, transposase, IS200 family8e-24108
NC_014376:597000:603525603525603998474Clostridium saccharolyticum WM1 chromosome, complete genome2e-23107
NC_017353:505935:523995523995524477483Staphylococcus lugdunensis N920143, complete genometransposase6e-23106
NC_013893:511222:528600528600529082483Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeIS605/IS200-like transposase6e-23106
NC_015760:123929:144004144004144420417Streptococcus salivarius CCHSS3, complete genomeIS657, transposase, IS200 family3e-21100
NC_016627:3972751:398957839895783990033456Clostridium clariflavum DSM 19732 chromosome, complete genometransposase3e-2097.1
NC_016627:3205333:324673832467383247193456Clostridium clariflavum DSM 19732 chromosome, complete genometransposase3e-2097.1
NC_016627:3125169:312516931251693125624456Clostridium clariflavum DSM 19732 chromosome, complete genometransposase3e-2097.1
NC_010498:1094000:110850711085071108881375Escherichia coli SMS-3-5, complete genome2e-1994.4
NC_015437:1066014:108879910887991089260462Selenomonas sputigena ATCC 35185 chromosome, complete genometransposase IS200-family protein3e-1994
NC_015437:2354429:236294323629432363404462Selenomonas sputigena ATCC 35185 chromosome, complete genometransposase IS200-family protein3e-1994
NC_015437:227420:240360240360240821462Selenomonas sputigena ATCC 35185 chromosome, complete genometransposase IS200-family protein3e-1994
NC_014376:3399366:340687234068723407327456Clostridium saccharolyticum WM1 chromosome, complete genometransposase IS200-family protein5e-1993.2
NC_016052:2201211:220800422080042208459456Tetragenococcus halophilus NBRC 12172, complete genomeputative transposase for insertion sequence element2e-1891.3
NC_015437:697051:720410720410720871462Selenomonas sputigena ATCC 35185 chromosome, complete genometransposase IS200-family protein3e-1890.5
NC_010609:1077453:109590310959031096361459Lactobacillus reuteri JCM 1112, complete genometransposase6e-1889.4
NC_009513:1184000:118671511867151187173459Lactobacillus reuteri F275, complete genometransposase IS200-family protein6e-1889.4
NC_017160:737000:752743752743753132390Yersinia pestis D182038 chromosome, complete genomeIS1541, transposase7e-1889.4
NC_011134:1222739:123642612364261236899474Streptococcus equi subsp. zooepidemicus str. MGCS10565, completetransposase IS200 Family4e-1786.7
NC_011134:1222739:123567412356741235964291Streptococcus equi subsp. zooepidemicus str. MGCS10565, completetransposase of IS200 family9e-1785.5
NC_015977:3215770:322571632257163226147432Roseburia hominis A2-183 chromosome, complete genometransposase IS200-like protein1e-1478.6
NC_004193:241480:255889255889256098210Oceanobacillus iheyensis HTE831, complete genometransposase for IS6571e-1375.1
NC_015977:3215770:323570632357063236221516Roseburia hominis A2-183 chromosome, complete genometransposase IS200-like protein1e-1374.7
NC_009706:2925000:293540629354062935729324Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein6e-1372.8
NC_011837:2856500:286690828669082867231324Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-1372.8
NC_015152:2549756:258849325884932588912420Spirochaeta sp. Buddy chromosome, complete genometransposase IS200-family protein1e-1271.6
NC_019940:2931500:293819129381912938622432Thioflavicoccus mobilis 8321 chromosome, complete genometransposase2e-1271.2
NC_014107:171170:183039183039183605567Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,putative transposase3e-1167.4
NC_014972:2659388:267801626780162678528513Desulfobulbus propionicus DSM 2032 chromosome, complete genome3e-1167
NC_020409:297258:312757312757313188432Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completetransposase1e-1065.5
NC_020409:2856481:288458628845862885017432Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completetransposase1e-1065.5
NC_004757:2412161:242759824275982428041444Nitrosomonas europaea ATCC 19718, complete genomeTransposase IS200 like4e-1063.5
NC_002506:370629:428335428335428772438Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeIS1004 transposase6e-1062.8
NC_012667:931390:938381938381938818438Vibrio cholerae MJ-1236 chromosome 2, complete genomeIS1004 transposase6e-1062.8
NC_016446:119914:128876128876129313438Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeIS1004 transposase6e-1062.8
NC_016945:370471:428154428154428591438Vibrio cholerae IEC224 chromosome II, complete sequenceIS1004 transposase6e-1062.8
NC_017269:303500:325369325369325806438Vibrio cholerae LMA3984-4 chromosome II, complete sequenceIS1004 transposase6e-1062.8
NC_002506:207097:219825219825220262438Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeIS1004 transposase6e-1062.8
NC_009456:787322:806473806473806910438Vibrio cholerae O395 chromosome 1, complete sequenceIS1004 transposase6e-1062.8
NC_009456:998935:100583210058321006269438Vibrio cholerae O395 chromosome 1, complete sequenceIS1004 transposase6e-1062.8
NC_016945:207089:219805219805220242438Vibrio cholerae IEC224 chromosome II, complete sequenceIS1004 transposase6e-1062.8
NC_016446:979884:992600992600993037438Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeIS1004 transposase6e-1062.8
NC_012667:46432:533295332953766438Vibrio cholerae MJ-1236 chromosome 2, complete genomeIS1004 transposase6e-1062.8
NC_012583:440420:457032457032457469438Vibrio cholerae O395 chromosome chromosome II, complete sequenceIS1004 transposase6e-1062.8
NC_012583:242760:254700254700255137438Vibrio cholerae O395 chromosome chromosome II, complete sequenceIS1004 transposase6e-1062.8
NC_012580:207025:219753219753220190438Vibrio cholerae M66-2 chromosome II, complete sequenceIS1004 transposase6e-1062.8
NC_014828:541874:559004559004559141138Ethanoligenens harbinense YUAN-3 chromosome, complete genome1e-0961.6
NC_010674:3674739:369905036990503699220171Clostridium botulinum B str. Eklund 17B, complete genometransposase, family1e-0858.9
NC_015572:2186394:221154422115442211978435Methylomonas methanica MC09 chromosome, complete genometransposase IS200-family protein1e-0858.9
NC_007168:1923723:194127019412701941590321Staphylococcus haemolyticus JCSC1435, complete genomeIS605/IS200-like transposase2e-0858.2
NC_008321:2922000:293074729307472931181435Shewanella sp. MR-4, complete genometransposase IS200-family protein2e-0858.2
NC_015731:2039317:206137620613762061816441Nitrosomonas sp. Is79A3 chromosome, complete genometransposase IS200-family protein2e-0857.4
NC_015222:1843093:184466718446671845098432Nitrosomonas sp. AL212 chromosome, complete genometransposase IS200-family protein1e-0755.5
NC_006371:1411335:144036314403631440710348Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical transposase2e-0754.7
NC_014221:1518583:152608315260831526511429Truepera radiovictrix DSM 17093 chromosome, complete genometransposase IS200-family protein2e-0754.3
NC_014221:1277022:128304812830481283476429Truepera radiovictrix DSM 17093 chromosome, complete genometransposase IS200-family protein2e-0754.3
NC_014221:591785:600717600717601145429Truepera radiovictrix DSM 17093 chromosome, complete genometransposase IS200-family protein2e-0754.3
NC_014972:544146:575372575372575728357Desulfobulbus propionicus DSM 2032 chromosome, complete genome6e-0752.8
NC_014935:836868:844784844784845212429Nitratifractor saLSUginis DSM 16511 chromosome, complete genometransposase is200-family protein2e-0651.6
NC_014935:1389000:140131114013111401739429Nitratifractor saLSUginis DSM 16511 chromosome, complete genometransposase is200-family protein2e-0651.6
NC_005126:4857500:485951648595164859956441Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS200 family2e-0651.2
NC_005126:4857500:485755848575584857998441Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS200 family2e-0651.2
NC_005126:1549066:156509915650991565539441Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS200 Familly2e-0651.2
NC_008150:2574794:258636625863662586635270Yersinia pestis Antiqua, complete genomeputative transposase3e-0650.8
NC_011768:1718869:174077417407741741208435Desulfatibacillum alkenivorans AK-01, complete genometransposase IS200-family protein3e-0650.4