Pre_GI: BLASTP Hits

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Query: NC_007606:1515403:1524172 Shigella dysenteriae Sd197, complete genome

Start: 1524172, End: 1524657, Length: 486

Host Lineage: Shigella dysenteriae; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. Causes bacillary dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella dysenteriae is the major cause of Shigella-related deaths in developing nations, mostly in young children.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004741:1792442:1796084179608417976491566Shigella flexneri 2a str. 2457T, complete genome3e-63240
NC_011353:2004800:2016897201689720183061410Escherichia coli O157:H7 str. EC4115 chromosome, complete genome7e-71265
NC_006511:25796:4011840118415901473Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC5e-0753.5
NC_009615:2709040:2716974271697427184251452Parabacteroides distasonis ATCC 8503 chromosome, complete genomearylsulfatase6e-1063.2
AP010958:1711656:1723544172354417252261683Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein7e-79292
CP002185:1681327:1689762168976216914441683Escherichia coli W, complete genomeconserved protein7e-79292
NC_013364:1902761:1914649191464919163311683Escherichia coli O111:H- str. 11128, complete genomehypothetical protein7e-79292
NC_010473:1661000:1669461166946116711431683Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein7e-79292
NC_010067:1116148:1130602113060211322331632Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-22104
NC_010067:2881448:2885852288585228873451494Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0755.8
NC_012759:1462490:1470925147092514726071683Escherichia coli BW2952 chromosome, complete genomehypothetical protein7e-79292
NC_013008:2007228:2015873201587320173451473Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-78291
NC_010102:25893:3578335783372761494Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-0752.8
NC_011601:1675000:1683488168348816851701683Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein6e-79292
NC_013353:1711656:1723544172354417252261683Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein7e-79292
AC_000091:1574000:1582556158255615842381683Escherichia coli W3110 DNA, complete genomehypothetical protein7e-79292
NC_013361:2047170:2059058205905820607401683Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein7e-79292
NC_000913:1570431:1578866157886615805481683Escherichia coli K12, complete genomehypothetical protein7e-79292
NC_012967:1546000:1554793155479315564751683Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-78290
NC_003197:25803:4013140131416241494Salmonella typhimurium LT2, complete genomeputative arylsulfatase5e-0753.5
NC_016863:25804:4013240132416251494Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative arylsulfatase5e-0753.5
NC_016856:25803:4013140131416241494Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative arylsulfatase5e-0753.5
NC_016857:25803:4013140131416241494Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative arylsulfatase5e-0753.5
NC_011750:12047:1679516795183241530Escherichia coli IAI39 chromosome, complete genomeputative Cerebroside-sulfatase1e-0755.8
NC_003198:25807:4012840128416211494Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative secreted sulfatase5e-0753.5
NC_016860:25758:4013140131416241494Salmonella enterica subsp. enterica serovar Typhimurium strputative secreted sulfatase5e-0753.5
NC_016810:25803:4013140131416241494Salmonella enterica subsp. enterica serovar Typhimurium strputative secreted sulfatase5e-0753.5
NC_016831:25760:4012940129416221494Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative secreted sulfatase5e-0753.5
NC_004631:25807:4012840128416211494Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative secreted sulfatase5e-0753.5
NC_011741:1579375:1587810158781015894921683Escherichia coli IAI1 chromosome, complete genomeputative sulfatase7e-79292
NC_011750:1849561:1857997185799718596791683Escherichia coli IAI39 chromosome, complete genomeputative sulfatase1e-78291
NC_007384:1696831:1706999170699917086811683Shigella sonnei Ss046, complete genomeputative sulfatase6e-79292
NC_011748:1684777:1693212169321216948941683Escherichia coli 55989, complete genomeputative sulfatase7e-79292
CU928145:1684777:1693212169321216948941683Escherichia coli 55989 chromosome, complete genomeputative sulfatase7e-79292
NC_011751:1770376:1778811177881117804931683Escherichia coli UMN026 chromosome, complete genomeputative sulfatase4e-78289
NC_008258:1750964:1757742175774217592321491Shigella flexneri 5 str. 8401, complete genomeputative sulfatase6e-52202
NC_002695:2091890:2102086210208621038011716Escherichia coli O157:H7 str. Sakai, complete genomeputative sulfatase5e-79292
NC_002655:1966464:1984671198467119863861716Escherichia coli O157:H7 EDL933, complete genomeputative sulfatase6e-79292
NC_007613:1533024:1544371154437115460531683Shigella boydii Sb227, complete genomeputative sulfatase6e-79292
CU928160:1579375:1587810158781015894921683Escherichia coli IAI1 chromosome, complete genomeputative sulfatase7e-79292
NC_008563:1620943:1629378162937816310601683Escherichia coli APEC O1, complete genomeputative sulfatase6e-79292
NC_011415:1669484:1677919167791916796011683Escherichia coli SE11 chromosome, complete genomeputative sulfatase7e-79292
NC_008253:1534840:1543275154327515449571683Escherichia coli 536, complete genomeputative sulfatase YdeN precursor6e-79292
NC_007946:1632025:1640460164046016421751716Escherichia coli UTI89, complete genomeputative sulfatase YdeN precursor6e-79292
NC_004431:1754627:1766514176651417682291716Escherichia coli CFT073, complete genomePutative sulfatase ydeN precursor6e-79292
NC_011294:25569:3988539885413781494Salmonella enterica subsp. enterica serovar Enteritidis strsecreted sulfatase5e-0753.5
NC_009615:2709040:2725856272585627272141359Parabacteroides distasonis ATCC 8503 chromosome, complete genomesecreted sulfatase1e-0755.8
NC_017046:25758:4015540155416241470Salmonella enterica subsp. enterica serovar Typhimurium str. 798secreted sulfatase5e-0753.5
NC_009800:1589000:1597665159766515993471683Escherichia coli HS, complete genomesulfatase6e-79292
CP002516:2395578:2414404241440424160861683Escherichia coli KO11, complete genomesulfatase7e-79292
NC_010498:1659328:1669676166967616712951620Escherichia coli SMS-3-5, complete genomesulfatase4e-71266
NC_011742:1574036:1582471158247115841531683Escherichia coli S88 chromosome, complete genomesulfatase6e-79292
NC_010468:2345781:2361342236134223630241683Escherichia coli ATCC 8739, complete genomesulfatase6e-79292
NC_016902:2395578:2414404241440424160861683Escherichia coli KO11FL chromosome, complete genomesulfatase7e-79292
NC_016832:25807:4012840128416211494Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Sulfatase5e-0753.9
NC_011080:25751:4012240122416151494Salmonella enterica subsp. enterica serovar Newport str. SL254,sulfatase5e-0753.5
NC_012947:2228235:2244378224437822460601683Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completesulfatase2e-78290
NC_011149:25760:4012840128416211494Salmonella enterica subsp. enterica serovar Agona str. SL483,sulfatase2e-0755.1
NC_011205:25805:4012940129416221494Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853sulfatase5e-0753.5
NC_013941:1894496:1906384190638419080991716Escherichia coli O55:H7 str. CB9615 chromosome, complete genomesulfatase5e-79292
NC_016822:1781644:1789957178995717916391683Shigella sonnei 53G, complete genomesulfatase6e-79292
NC_011094:25762:4013040130416231494Salmonella enterica subsp. enterica serovar Schwarzengrund strsulfatase2e-0755.1
NC_011274:25692:4001640016415091494Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91sulfatase5e-0753.5