Some Help

Query: NC_007604:2555000 Synechococcus elongatus PCC 7942, complete genome

Start: 2555000, End: 2577886, Length: 22887

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_006576:1743500*1743500176608122582Synechococcus elongatus PCC 6301, complete genome036070BLASTN svgBLASTP svg
NC_008578:2431074*2431074245799926926Acidothermus cellulolyticus 11B, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_003888:4251867*4251867430640654540Streptomyces coelicolor A3(2), complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014830:4012999*4012999403999927001Intrasporangium calvum DSM 43043 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014151:4106624*4106624413399927376Cellulomonas flavigena DSM 20109 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013521:4240468*4240468426799927532Sanguibacter keddieii DSM 10542, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006177:3549467*3549467357099921533Symbiobacterium thermophilum IAM 14863, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010804:52000*520007319121192Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-0869.9BLASTN svgBLASTP svg
NC_015138:111600416004Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_015422:111870118701Alicycliphilus denitrificans K601 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_016002:111459914599Pseudogulbenkiania sp. NH8B, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014727:798191*79819182159923409Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_008054:74570474570476810022397Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete2e-0765.9BLASTN svgBLASTP svg
NC_012724:1*11851018510Burkholderia glumae BGR1 chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007604:1512709*1512709153759924891Synechococcus elongatus PCC 7942, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006576:2610565*2610565263481924255Synechococcus elongatus PCC 6301, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004113:35005935005937119121133Thermosynechococcus elongatus BP-1, complete genome3e-0661.9BLASTN svgBLASTP svg