Pre_GI: BLASTP Hits

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Query: NC_007604:2555000:2574819 Synechococcus elongatus PCC 7942, complete genome

Start: 2574819, End: 2575742, Length: 924

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009617:3184924:3216396321639632174481053Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator4e-2099
NC_011661:961129:964640964640965623984Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator7e-2098.2
NC_015499:119200:1449201449201459421023Thermodesulfobium narugense DSM 14796 chromosome, complete genomeABC-type transporter, integral membrane subunit1e-1997.1
NC_003454:2080705:209843520984352099292858Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeBranched-chain amino acid transport system permease protein livM1e-1997.1
NC_011297:787932:793781793781794773993Dictyoglomus thermophilum H-6-12, complete genomebranched-chain amino acid ABC transporter permease protein2e-1996.7
NC_020291:6426704:644486264448626445827966Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeamino acid/amide ABC transporter membrane protein 2, HAAT family2e-1996.3
NC_015711:3085038:3109577310957731106411065Myxococcus fulvus HW-1 chromosome, complete genomeputative branched chain amino acid ABC transporter permease3e-1892.8
NC_012658:545840:548918548918549862945Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter permease2e-1789.7
NC_012724:3222415:3243959324395932451311173Burkholderia glumae BGR1 chromosome 1, complete genomeInner-membrane translocator4e-1789
NC_009255:1105786:1145385114538511465541170Burkholderia vietnamiensis G4 chromosome 2, complete sequenceinner-membrane translocator5e-1788.6
NC_010805:575709:5970025970025981711170Burkholderia multivorans ATCC 17616 chromosome 2, completebranched-chain amino acid transport system permease protein5e-1788.6
NC_010086:1816378:1877133187713318783021170Burkholderia multivorans ATCC 17616 chromosome 2, completeinner-membrane translocator5e-1788.6
NC_019897:2908971:2913408291340829151981791Thermobacillus composti KWC4 chromosome, complete genomebranched-chain amino acid ABC transporter permease5e-1788.6
NC_010676:2658495:2678591267859126797601170Burkholderia phytofirmans PsJN chromosome 2, complete sequenceinner-membrane translocator8e-1787.8
NC_008785:914411:9375709375709387391170Burkholderia mallei SAVP1 chromosome II, complete sequenceABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein1e-1687.4
NC_016633:1898234:1897221189722118982371017Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebranched-chain amino acid ABC transporter permease1e-1687
NC_015422:3836911:3838447383844738395231077Alicycliphilus denitrificans K601 chromosome, complete genomeABC transporter integral membrane subunit1e-1584
NC_015275:566000:5688205688205698991080Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, integral membrane subunit1e-1584
NC_013740:15401:195671956720547981Acidaminococcus fermentans DSM 20731, complete genomeinner-membrane translocator2e-1583.6
NC_008751:2774000:2792703279270327939261224Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeinner-membrane translocator2e-1583.2
NC_002937:614000:6191546191546203771224Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehigh-affinity branched-chain amino acid ABC transporter, permease protein2e-1583.2
NC_015318:1583839:158961515896151590490876Hippea maritima DSM 10411 chromosome, complete genomeABC transporter integral membrane subunit4e-1582.4
NC_013198:298000:317201317201318151951Lactobacillus rhamnosus GG, complete genomehigh affinity branched-chain amino acid ABC transporter, permease protein7e-1581.6
NC_013199:282901:299234299234300184951Lactobacillus rhamnosus Lc 705, complete genomehigh affinity branched-chain amino acid ABC transporter, permease component7e-1581.6
NC_007503:2010858:201490820149082015876969Carboxydothermus hydrogenoformans Z-2901, complete genomehigh affinity branched-chain amino acid ABC transporter, permease protein8e-1581.3
NC_008786:3323167:3346604334660433476801077Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator1e-1480.9
NC_010172:3712000:3731947373194737337281782Methylobacterium extorquens PA1, complete genomeABC transporter related2e-1480.1
NC_014837:1144500:1166422116642211688902469Pantoea sp. At-9b chromosome, complete genomeABC transporter-like protein3e-1479.7
NC_010999:252605:268261268261269211951Lactobacillus casei, complete genomeBranched-chain amino acid ABC transporter, permease protein5e-1478.6
NC_008526:250000:268989268989269939951Lactobacillus casei ATCC 334, complete genomePredicted amino acid ABC-type transport system, permease component5e-1478.6
NC_014334:267409:285830285830286780951Lactobacillus casei str. Zhang chromosome, complete genomeputative amino acid ABC transporter permease5e-1478.6
NC_007511:719493:7333997333997346701272Burkholderia sp. 383 chromosome 2, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit5e-1478.6
NC_012108:3824977:3828303382830338301771875Desulfobacterium autotrophicum HRM2, complete genomeABC-type branched-chain amino acid transport system, permease component9e-1477.8
NC_008702:4064470:4088347408834740894441098Azoarcus sp. BH72, complete genomeputative branched-chain amino acid transport permease9e-1477.8
NC_010725:3992948:4015262401526240170431782Methylobacterium populi BJ001, complete genomeABC transporter related1e-1377
NC_008786:4216152:423616342361634237110948Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator1e-1377
NC_012988:4075429:4097873409787340996541782Methylobacterium extorquens DM4, complete genomebranched chain amino acid ABC transporter ATPase/permease2e-1377
NC_010552:2089140:2090611209061120918821272Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceinner-membrane translocator2e-1376.6
NC_010515:2358134:2374273237427323755441272Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceinner-membrane translocator2e-1376.6
NC_008061:428501:4431034431034443741272Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceinner-membrane translocator2e-1376.6
NC_008543:2035292:2035292203529220365631272Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceinner-membrane translocator2e-1376.6
NC_011001:2517159:2517929251792925192001272Burkholderia cenocepacia J2315 chromosome 2, complete sequenceleucine/isoleucine/valine transporter permease subunit2e-1376.6
NC_013510:3324978:3332076333207633332571182Thermomonospora curvata DSM 43183, complete genomeinner-membrane translocator3e-1375.9
NC_010557:679656:6929566929566941251170Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceinner-membrane translocator8e-1374.7
NC_012791:2233098:2246354224635422475501197Variovorax paradoxus S110 chromosome 1, complete genomeinner-membrane translocator7e-1374.7
NC_009718:579291:5821335821335838211689Fervidobacterium nodosum Rt17-B1, complete genomeinner-membrane translocator2e-1273.6
NC_014098:3133440:3133440313344031344711032Bacillus tusciae DSM 2912 chromosome, complete genomeinner-membrane translocator2e-1273.2
NC_015318:981989:996989996989997915927Hippea maritima DSM 10411 chromosome, complete genomeABC transporter integral membrane subunit3e-1272.8
NC_011979:3070110:307011030701103071072963Geobacter sp. FRC-32, complete genomeinner-membrane translocator3e-1272.8
NC_014831:2133060:2170027217002721727202694Thermaerobacter marianensis DSM 12885 chromosome, complete genomeABC transporter related protein5e-1272
NC_014844:2638994:2656306265630626575981293Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeinner-membrane translocator2e-1170.5
NC_010424:697187:7023527023527033591008Candidatus Desulforudis audaxviator MP104C, complete genomeinner-membrane translocator1e-1170.5
NC_015556:819503:8333088333088345821275Pseudomonas fulva 12-X chromosome, complete genomeinner-membrane translocator4e-1168.9
NC_015957:8103472:8103472810347281052261755Streptomyces violaceusniger Tu 4113 chromosome, complete genomeABC transporter integral membrane subunit7e-1168.2
NC_021066:1393750:1408936140893614102221287Raoultella ornithinolytica B6, complete genomeBranched-chain amino acid transport system permease protein LivM1e-1067.4
NC_016582:9422650:9440777944077794425161740Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative branched-chain amino acid ABC transporter permease2e-1066.6
NC_005773:694990:6999396999397012521314Pseudomonas syringae pv. phaseolicola 1448A, complete genomehigh-affinity branched-chain amino acid ABC transporter, permease protein BraE2e-1066.6
NC_021177:1736854:1748293174829317501251833Streptomyces fulvissimus DSM 40593, complete genomeBranched chain amino acid transport permease3e-1066.2
NC_005125:2811986:2850775285077528518841110Gloeobacter violaceus PCC 7421, complete genomebranched-chain amino acid transport protein BraE homolog3e-1066.2
NC_009436:2685910:2689212268921226905011290Enterobacter sp. 638, complete genomeinner-membrane translocator3e-1066.2
NC_011768:79297:9729197291983641074Desulfatibacillum alkenivorans AK-01, complete genomeinner-membrane translocator4e-1065.9
NC_011060:1898224:193093419309341931929996Pelodictyon phaeoclathratiforme BU-1, complete genomeinner-membrane translocator5e-1065.1
NC_007948:360199:371010371010371945936Polaromonas sp. JS666, complete genomeinner-membrane translocator1e-0963.9
NC_014614:2295131:231127223112722312138867Clostridium sticklandii, complete genomeInner-membrane translocator precursor4e-0962.4
NC_013939:913890:930581930581931426846Deferribacter desulfuricans SSM1, complete genomebranched-chain amino acid ABC transporter permease4e-0962.4
NC_017059:469108:4891294891294902501122Rhodospirillum photometricum DSM 122, complete genomeInner-membrane translocator7e-0961.6
NC_015224:279037:2836292836292849151287Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,leucine/isoleucine/valine transporter permease subunit7e-0961.6
NC_011060:2099255:210653921065392107402864Pelodictyon phaeoclathratiforme BU-1, complete genomeinner-membrane translocator9e-0961.2
NC_010572:6463939:6486413648641364882091797Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative branched-chain amino acid ABC transporter permease protein1e-0861.2
NC_008563:3888232:3888232388823238895091278Escherichia coli APEC O1, complete genomeleucine/isoleucine/valine transporter subunit LivM1e-0860.8
NC_007946:3855445:3855445385544538567221278Escherichia coli UTI89, complete genomehigh-affinity branched-chain amino acid transport system permease protein livM1e-0860.8
NC_011742:3799788:3802980380298038042571278Escherichia coli S88 chromosome, complete genomeleucine/isoleucine/valine transporter permease subunit1e-0860.8
NC_015953:1581542:1595003159500315968021800Streptomyces sp. SirexAA-E chromosome, complete genomeinner-membrane translocator1e-0860.8
NC_017192:1063955:106606210660621067027966Arcobacter sp. L, complete genomebranched-chain amino acid ABC transporter permease component2e-0859.7
NC_013895:1282566:1293495129349512945141020Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete7e-0858.2
NC_008701:1363665:138788413878841388849966Pyrobaculum islandicum DSM 4184, complete genomeinner-membrane translocator1e-0757.4
NC_010003:528855:5474935474935492081716Petrotoga mobilis SJ95, complete genomeinner-membrane translocator1e-0757.4
NC_014830:3438504:3477396347739634784031008Intrasporangium calvum DSM 43043 chromosome, complete genomeinner-membrane translocator1e-0757.4
NC_003155:7453994:7473858747385874756331776Streptomyces avermitilis MA-4680, complete genomebranched-chain amino acid ABC transporter permease protein2e-0757
NC_009073:803372:806848806848807813966Pyrobaculum calidifontis JCM 11548, complete genomeinner-membrane translocator2e-0756.6
NC_013524:392089:4069004069004088221923Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeABC transporter related protein3e-0756.2
NC_014376:3214222:3214222321422232153251104Clostridium saccharolyticum WM1 chromosome, complete genomeinner-membrane translocator4e-0755.8
NC_013522:698114:721346721346722218873Thermanaerovibrio acidaminovorans DSM 6589, complete genomeinner-membrane translocator4e-0755.8
NC_010511:6169468:618855961885596189512954Methylobacterium sp. 4-46 chromosome, complete genomeinner-membrane translocator1e-0654.3
NC_010676:2720068:272449027244902725470981Burkholderia phytofirmans PsJN chromosome 2, complete sequenceinner-membrane translocator2e-0653.5
NC_014210:3763940:377551037755103776499990Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,inner-membrane translocator2e-0653.5
NC_009092:3057319:3074392307439230754651074Shewanella loihica PV-4, complete genomeinner-membrane translocator7e-0651.6
NC_018000:1914945:1948031194803119491281098Sinorhizobium fredii USDA 257 chromosome, complete genomebranched-chain amino acid ABC transporter permease9e-0651.2