Pre_GI: BLASTP Hits

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Query: NC_007604:2213659:2236384 Synechococcus elongatus PCC 7942, complete genome

Start: 2236384, End: 2237643, Length: 1260

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:2073163:2079387207938720806461260Synechococcus elongatus PCC 6301, complete genomehypothetical protein0718
NC_014121:4043198:4068499406849940697251227Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-27123
NC_006576:161112:1694771694771707121236Synechococcus elongatus PCC 6301, complete genomehypothetical protein6e-1995.5
NC_007604:1442500:1450087145008714512411155Synechococcus elongatus PCC 7942, complete genomehypothetical protein7e-1995.5
NC_010172:1222150:1240255124025512414901236Methylobacterium extorquens PA1, complete genomehypothetical protein6e-1375.9
NC_011757:1246000:1267355126735512685901236Methylobacterium chloromethanicum CM4, complete genomehypothetical protein1e-1275.1
NC_010505:400950:4082794082794095291251Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein2e-1273.9
NC_012988:1540587:1565855156585515670211167Methylobacterium extorquens DM4, complete genomemultidrug resistance efflux pump6e-1168.9
NC_012808:921985:9328259328259339911167Methylobacterium extorquens AM1, complete genomeMultidrug resistance efflux pump1e-1068.2
NC_011001:854713:8757158757158768091095Burkholderia cenocepacia J2315 chromosome 2, complete sequenceefflux system transport protein1e-0757.8
NC_008061:1864282:1865807186580718669011095Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencesecretion protein HlyD2e-0654.3
NC_010515:678000:6785156785156796091095Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencesecretion protein HlyD family protein2e-0654.3