Pre_GI: BLASTP Hits

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Query: NC_007604:2213659:2228529 Synechococcus elongatus PCC 7942, complete genome

Start: 2228529, End: 2229017, Length: 489

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:2073163:208801320880132088501489Synechococcus elongatus PCC 6301, complete genomehypothetical protein3e-72270
NC_005071:288922:339767339767340351585Prochlorococcus marinus str. MIT 9313, complete genomeStaphylococcus nuclease (SNase) homologues1e-28125
NC_005070:334952:343315343315343929615Synechococcus sp. WH 8102, complete genomeStaphylococcal nuclease homologue1e-23108
NC_009927:253250:253250253250253777528Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencestaphylococcus nuclease, putative1e-21102
NC_005070:1486496:152121015212101521866657Synechococcus sp. WH 8102, complete genomeStaphylococcal nuclease homologue2e-2098.2
NC_007513:438438:462952462952463425474Synechococcus sp. CC9902, complete genomenuclease (SNase-like)4e-2097.1
NC_009481:1927995:193761319376131938212600Synechococcus sp. WH 7803 chromosome, complete genomenuclease-like protein2e-1891.7
NC_012918:2758775:279392827939282794467540Geobacter sp. M21 chromosome, complete genomenuclease1e-1789.4
NC_014972:210500:217951217951218613663Desulfobulbus propionicus DSM 2032 chromosome, complete genomenuclease6e-1786.7
NC_010628:1734000:175234217523421752782441Nostoc punctiforme PCC 73102, complete genomenuclease (SNase domain protein)1e-1582
NC_012918:2758775:280401928040192804495477Geobacter sp. M21 chromosome, complete genomenuclease2e-1581.3
NC_009481:845500:853538853538854140603Synechococcus sp. WH 7803 chromosome, complete genomenuclease-like protein4e-1580.5
NC_008319:1119076:113067811306781131214537Synechococcus sp. CC9311, complete genomeStaphylococcal nuclease homologue4e-1477.4
NC_012969:2136243:221955522195552220109555Methylovorus glucosetrophus SIP3-4 chromosome, complete genomenuclease3e-1477.4
NC_014733:2095996:211619221161922116746555Methylovorus sp. MP688 chromosome, complete genomenuclease (snase domain protein)1e-1375.9
NC_016513:1924242:192915919291591929659501Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeprotein ParB1e-1375.5
NC_013416:1588369:159322915932291593729501Aggregatibacter actinomycetemcomitans D11S-1, complete genomeprotein ParB1e-1375.5
NC_007517:3430237:344916434491643449706543Geobacter metallireducens GS-15, complete genomeSNase-like nuclease2e-1374.7
NC_008751:2988235:300617030061703006868699Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomenuclease (SNase domain protein)3e-1374.3
NC_003919:3812778:383808738380873838824738Xanthomonas axonopodis pv. citri str. 306, complete genomesuccinoglycan biosynthesis protein2e-1271.6
NC_016616:760145:768659768659769195537Dechlorosoma suillum PS chromosome, complete genomemicrococcal nuclease-like nuclease9e-1269.3
NC_012796:4693500:472231247223124722971660Desulfovibrio magneticus RS-1, complete genomeputative nuclease2e-1168.2
NC_009715:1829978:186455318645531864999447Campylobacter curvus 525.92 chromosome, complete genomeATP-dependent hsl protease ATP-binding subunit HslU2e-1168.2
NC_002937:2068117:208797820879782088394417Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completenuclease, putative4e-1167.4
NC_016616:2112211:211854521185452119039495Dechlorosoma suillum PS chromosome, complete genomemicrococcal nuclease-like nuclease9e-1166.2
NC_010660:175200:190143190143190643501Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-1065.1
NC_007608:97092:110172110172110633462Shigella boydii Sb227 plasmid pSB4_227, complete sequencehypothetical protein3e-1064.7
NC_011749:34056:535635356354099537Escherichia coli UMN026 plasmid p1ESCUM, complete sequencenuclease4e-1063.9
NC_002937:1548081:156013015601301560939810Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completenuclease domain protein6e-1063.5
NC_009138:467268:475095475095475412318Herminiimonas arsenicoxydans, complete genomehypothetical protein6e-1063.5
NC_013222:615948:631046631046631489444Robiginitalea biformata HTCC2501, complete genomepredicted micrococcal nuclease-like protein7e-1063.2
NC_014910:1708045:172307217230721723551480Alicycliphilus denitrificans BC chromosome, complete genomenuclease (snase domain-containing protein)1e-0962.4
NC_008786:4070753:407453540745354074996462Verminephrobacter eiseniae EF01-2, complete genomenuclease (SNase domain protein)3e-0961.2
NC_008255:1344674:136424313642431364743501Cytophaga hutchinsonii ATCC 33406, complete genomenuclease3e-0961.2
NC_011667:1:391239124400489Thauera sp. MZ1T plasmid pTha01, complete sequencenuclease (SNase domain protein)8e-0959.7
NC_016941:807155:842093842093842761669Staphylococcus aureus subsp. aureus MSHR1132, complete genomethermonuclease3e-0857.8
NC_002745:840848:855748855748856434687Staphylococcus aureus subsp. aureus N315, complete genomestaphylococcal nuclease4e-0857.4
NC_017337:853221:866882866882867568687Staphylococcus aureus subsp. aureus ED133 chromosome, completestaphylococcal thermonuclease precursor5e-0857
NC_002952:884500:895661895661896347687Staphylococcus aureus subsp. aureus MRSA252, complete genomethermonuclease precursor6e-0856.6
NC_017351:885000:895780895780896466687Staphylococcus aureus subsp. aureus 11819-97 chromosome, completethermonuclease6e-0856.6
NC_017342:2486000:249197024919702492656687Staphylococcus aureus subsp. aureus TCH60 chromosome, completethermonuclease6e-0856.6
NC_017322:1260526:126853212685321269194663Sinorhizobium meliloti BL225C chromosome, complete genomenuclease7e-0856.6
NC_013132:782846:798974798974799489516Chitinophaga pinensis DSM 2588, complete genomenuclease (SNase domain protein)8e-0856.2
NC_016928:838500:849565849565850251687Staphylococcus aureus subsp. aureus M013 chromosome, completephage-encoded chromosome degrading nuclease YokF8e-0856.2
NC_008319:1119076:113742511374251137862438Synechococcus sp. CC9311, complete genomeputative nuclease2e-0755.1
NC_013526:911909:922406922406923182777Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeMicrococcal nuclease2e-0754.7
NC_009439:574437:574676574676575476801Pseudomonas mendocina ymp, complete genomenuclease4e-0753.9
NC_003450:1903110:196634919663491966987639Corynebacterium glutamicum ATCC 13032, complete genomemicrococcal nuclease-like protein3e-0650.8
NC_014248:943198:944286944286944879594Nostoc azollae 0708 chromosome, complete genomenuclease6e-0650.1