Pre_GI: BLASTP Hits

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Query: NC_007604:2213659:2226468 Synechococcus elongatus PCC 7942, complete genome

Start: 2226468, End: 2226803, Length: 336

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:2073163:209011620901162090562447Synechococcus elongatus PCC 6301, complete genomehypothetical protein3e-59226
NC_016776:4525065:454556945455694545919351Bacteroides fragilis 638R, complete genomeputative translation initation factor2e-1478.2
NC_006347:4562242:457944445794444579794351Bacteroides fragilis YCH46, complete genomeputative translation initiation factor SUI12e-1478.2
NC_003228:4449072:446544044654404465790351Bacteroides fragilis NCTC 9343, complete genomeputative translation initation factor5e-1476.6
NC_007517:3151742:316885231688523169217366Geobacter metallireducens GS-15, complete genomehypothetical protein1e-1374.7
NC_011146:482440:489753489753490121369Geobacter bemidjiensis Bem, complete genometranslation initiation factor SUI11e-1272
NC_015740:926920:940686940686941057372Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetranslation initiation factor SUI14e-1270.1
NC_020063:2480983:250461025046102504936327Enterobacteriaceae bacterium strain FGI 57, complete genometranslation initiation factor 1 (eIF-1/SUI1)1e-1168.6
NC_007954:3171081:320778632077863208151366Shewanella denitrificans OS217, complete genometranslation initiation factor SUI12e-1167.8
NC_005042:165530:187391187391187714324Prochlorococcus marinus subsp. marinus str. CCMP1375, completeTranslation initiation factor SUI12e-1167.8
NC_009434:1068281:108189810818981082269372Pseudomonas stutzeri A1501, complete genometranslation initiation factor SUI13e-1167
NC_009092:1305355:132109213210921321421330Shewanella loihica PV-4, complete genometranslation initiation factor SUI11e-1065.5
NC_014973:4630132:464869246486924648997306Geobacter sp. M18 chromosome, complete genometranslation initiation factor SUI13e-1063.9
NC_000909:404961:412231412231412542312Methanocaldococcus jannaschii DSM 2661, complete genometranslation initiation factor IF-14e-1063.5
NC_014122:549932:563665563665563973309Methanocaldococcus infernus ME chromosome, complete genometranslation initiation factor SUI16e-1062.8
NC_013457:140474:162597162597162908312Vibrio sp. Ex25 chromosome 2, complete genometranslation initiation factor SUI1-related protein8e-1062.4
NC_013887:1668913:167666316766631676971309Methanocaldococcus sp. FS406-22 chromosome, complete genometranslation initiation factor SUI11e-0961.6
NC_013407:203539:217610217610217918309Methanocaldococcus vulcanius M7, complete genometranslation initiation factor SUI13e-0960.5
NC_016628:193000:214859214859215170312Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceTranslation initiation factor 13e-0960.5
NC_005140:883857:889161889161889472312Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein3e-0960.5
NC_015562:899030:914873914873915181309Methanotorris igneus Kol 5 chromosome, complete genometranslation factor SUI1-like protein4e-0960.1
NC_015636:788532:795473795473795781309Methanothermococcus okinawensis IH1 chromosome, complete genometranslation factor SUI1-like protein5e-0960.1
NC_013156:633475:646608646608646916309Methanocaldococcus fervens AG86, complete genometranslation initiation factor SUI17e-0959.3
NC_009635:1444461:145260414526041452945342Methanococcus aeolicus Nankai-3 chromosome, complete genometranslation initiation factor Sui12e-0857.8
NC_014222:1188719:120345712034571203765309Methanococcus voltae A3 chromosome, complete genometranslation initiation factor SUI12e-0857.8
NC_005877:665092:676015676015676314300Picrophilus torridus DSM 9790, complete genometranslation initiation factor IF-13e-0857
NC_002578:1305781:131907613190761319375300Thermoplasma acidophilum DSM 1728, complete genometranslation initiation factor IF-14e-0856.6
NC_009634:759372:767050767050767373324Methanococcus vannielii SB chromosome, complete genometranslation initiation factor Sui15e-0856.6
NC_015474:301428:314351314351314647297Pyrococcus sp. NA2 chromosome, complete genometranslation initiation factor Sui16e-0856.2
NC_015847:1462068:146978014697801470088309Methanococcus maripaludis XI chromosome, complete genometranslation initiation factor Sui15e-0856.2
NC_005791:1377736:138544713854471385755309Methanococcus maripaludis S2, complete genometranslation initiation factor IF-15e-0856.2
NC_009135:130159:142574142574142882309Methanococcus maripaludis C5, complete genometranslation initiation factor SUI15e-0856.2
NC_009975:1163918:117632711763271176635309Methanococcus maripaludis C6, complete genometranslation initiation factor SUI15e-0856.2
NC_009637:646092:653802653802654110309Methanococcus maripaludis C7 chromosome, complete genometranslation initiation factor Sui15e-0856.2
NC_015424:2726223:272622327262232726552330Aeromonas veronii B565 chromosome, complete genometranslation initiation factor, Sui1 family-like protein1e-0755.5
NC_002689:309940:336650336650336952303Thermoplasma volcanium GSS1, complete genometranslation initiation factor IF-11e-0755.1
NC_003413:1666520:168011016801101680406297Pyrococcus furiosus DSM 3638, complete genometranslation initiation factor IF-11e-0755.1
NC_012883:287965:296039296039296323285Thermococcus sibiricus MM 739, complete genomeTranslation factor SUI1 like protein2e-0754.7
NC_000961:1532245:154521115452111545510300Pyrococcus horikoshii OT3, complete genometranslation initiation factor IF-12e-0754.7
NC_000868:318434:332032332032332331300Pyrococcus abyssi GE5, complete genometranslation initiation factor IF-12e-0754.7
NC_013922:2110894:212079221207922121088297Natrialba magadii ATCC 43099 chromosome, complete genometranslation initiation factor SUI13e-0753.9
NC_000916:1:575357536058306Methanothermobacter thermautotrophicus str. Delta H, completetranslation initiation factor IF-13e-0753.9
NC_014408:462195:471133471133471438306Methanothermobacter marburgensis str. Marburg chromosome, completetranslation initiation factor Sui13e-0753.9
NC_014205:1257652:128417612841761284490315Staphylothermus hellenicus DSM 12710 chromosome, complete genometranslation initiation factor SUI14e-0753.5
NC_013743:3681235:368364436836443683937294Haloterrigena turkmenica DSM 5511, complete genometranslation initiation factor SUI14e-0753.5
NC_014804:78248:876548765487950297Thermococcus barophilus MP chromosome, complete genometranslation initiation factor SUI1-like protein4e-0753.5
NC_009456:557962:567932567932568312381Vibrio cholerae O395 chromosome 1, complete sequencetranslation initiation factor Sui17e-0752.8
NC_007681:1007375:102125710212571021562306Methanosphaera stadtmanae DSM 3091, complete genomeprotein translation factor SUI1-like protein1e-0652
NC_012583:683887:695699695699696010312Vibrio cholerae O395 chromosome chromosome II, complete sequenceSui1 family protein1e-0652
NC_012667:839318:851509851509851820312Vibrio cholerae MJ-1236 chromosome 2, complete genometranslation initiation factor Sui11e-0652
NC_012622:1579927:160002616000261600328303Sulfolobus islandicus Y.G.57.14 chromosome, complete genometranslation initiation factor Sui11e-0652
NC_015216:742321:753941753941754276336Methanobacterium sp. AL-21 chromosome, complete genometranslation factor SUi1-like protein1e-0652
NC_013790:1115887:112439611243961124740345Methanobrevibacter ruminantium M1 chromosome, complete genometranslation initiation factor aSUI12e-0651.2
NC_014658:816282:831739831739832047309Methanothermus fervidus DSM 2088 chromosome, complete genometranslation initiation factor 1 (eif-1/sui1)4e-0650.4
NC_015666:2721350:273901227390122739305294Halopiger xanaduensis SH-6 chromosome, complete genometranslation initiation factor SUI14e-0650.1
NC_009515:705911:717535717535717876342Methanobrevibacter smithii ATCC 35061, complete genometranslation initiation factor Sui19e-0648.9