Some Help

Query: NC_007604:2213659:2224311 Synechococcus elongatus PCC 7942, complete genome

Start: 2224311, End: 2224742, Length: 432

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:2073163:209228820922882092719432Synechococcus elongatus PCC 6301, complete genomecytidine deaminase1e-79294
NC_017075:1233377:123874712387471239196450Rubrivivax gelatinosus IL144, complete genomecytidine deaminase-like protein6e-31132
NC_010617:558954:563188563188563625438Kocuria rhizophila DC2201, complete genomehypothetical protein4e-1580.1