Pre_GI: BLASTP Hits

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Query: NC_007604:1875268:1886477 Synechococcus elongatus PCC 7942, complete genome

Start: 1886477, End: 1887205, Length: 729

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:2423250:242975924297592430574816Synechococcus elongatus PCC 6301, complete genomehypothetical protein7e-122436
NC_007604:1875268:1887216188721618884511236Synechococcus elongatus PCC 7942, complete genomeresponse regulator receiver domain protein (CheY-like)9e-1167.4
NC_006576:2423250:2428600242860024298351236Synechococcus elongatus PCC 6301, complete genometwo-component response regulator1e-1067
NC_007759:2179000:219376221937622194511750Syntrophus aciditrophicus SB, complete genomecAMP-dependent transcriptional regulator1e-0963.5
NC_015957:10403997:104039971040399710404671675Streptomyces violaceusniger Tu 4113 chromosome, complete genomeCrp/Fnr family transcriptional regulator3e-0962
NC_020126:5470090:549252754925275493210684Myxococcus stipitatus DSM 14675, complete genomeCrp/Fnr family transcriptional regulator4e-0858.5
NC_020126:4622371:463142846314284632309882Myxococcus stipitatus DSM 14675, complete genomeCrp/Fnr family transcriptional regulator1e-0757
NC_008711:3701635:370163537016353702312678Arthrobacter aurescens TC1, complete genomeputative cyclic nucleotide-binding domain2e-0652.8
NC_015588:2939747:294064829406482941325678Isoptericola variabilis 225 chromosome, complete genometranscriptional regulator, Crp/Fnr family3e-0652.4
NC_002936:285527:286986286986287729744Dehalococcoides ethenogenes 195, complete genometranscriptional regulator, Crp/Fnr family9e-0650.8