Pre_GI: BLASTP Hits

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Query: NC_007604:1586243:1593215 Synechococcus elongatus PCC 7942, complete genome

Start: 1593215, End: 1595422, Length: 2208

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:2683467:2690440269044026926472208Synechococcus elongatus PCC 6301, complete genomehypothetical protein01439
NC_014729:1185294:1207587120758712102742688Halogeometricum borinquense DSM 11551 chromosome, complete genomehypothetical protein2e-1791.7
NC_015666:252740:2624452624452647182274Halopiger xanaduensis SH-6 chromosome, complete genomestem cell self-renewal protein Piwi3e-1480.9
NC_019792:2524130:2525063252506325277262664Natronobacterium gregoryi SP2 chromosome, complete genomehypothetical protein8e-1169.7
NC_016593:1466226:1489391148939114915232133Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein2e-0964.7
NC_012673:2064298:2079277207927720810941818Exiguobacterium sp. AT1b, complete genomestem cell self-renewal protein Piwi domain protein1e-0655.5