Pre_GI: BLASTP Hits

Some Help

Query: NC_007604:1145373:1157413 Synechococcus elongatus PCC 7942, complete genome

Start: 1157413, End: 1157931, Length: 519

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:456569:462873462873463391519Synechococcus elongatus PCC 6301, complete genomepredicted cation transporter1e-95347
NC_018691:761560:763946763946764503558Alcanivorax dieselolei B5 chromosome, complete genomeChaC-like protein6e-39159
NC_014323:3669704:368720636872063687805600Herbaspirillum seropedicae SmR1 chromosome, complete genomecation transport regulator protein1e-35149
NC_020211:3151458:315358831535883154328741Serratia marcescens WW4, complete genomecation transport regulator1e-2099
NC_010170:1219641:123272512327251233381657Bordetella petrii, complete genomeCation transport protein9e-2096.3
NC_004547:2285092:230192223019222302608687Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative cation transport protein6e-1993.6
NC_008686:1592073:159522415952241595760537Paracoccus denitrificans PD1222 chromosome 1, complete sequenceChaC family protein7e-1786.7
NC_004463:2262467:229518522951852295715531Bradyrhizobium japonicum USDA 110, complete genomeprobable cation transport protein3e-1684.7
NC_007005:321695:324350324350325018669Pseudomonas syringae pv. syringae B728a, complete genomeChaC-like protein1e-1582.4
NC_016812:4246542:427443342744334275143711Sinorhizobium fredii HH103, complete genomecation transport protein, ChaC related2e-1582
NC_017249:7917586:798242779824277982957531Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-1581.3
NC_019973:6102442:611134761113476111874528Mesorhizobium australicum WSM2073, complete genomeuncharacterized protein involved in cation transport3e-1580.9
NC_010002:4326509:434143943414394342065627Delftia acidovorans SPH-1, complete genomeChaC family protein3e-1168.2
NC_015563:3203012:323670732367073237333627Delftia sp. Cs1-4 chromosome, complete genomeChaC family protein4e-1167.4
NC_007510:1921251:194427019442701945013744Burkholderia sp. 383 chromosome 1, complete sequenceChaC-like protein4e-0857.4