Pre_GI: BLASTP Hits

Some Help

Query: NC_007517:1998342:2012333 Geobacter metallireducens GS-15, complete genome

Start: 2012333, End: 2013400, Length: 1068

Host Lineage: Geobacter metallireducens; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: First isolated from the Potomac river downstream of Washington, DC, USA in 1987. This organism actively moves towards metal attractants such as iron and manganese oxides, which are insoluble, and produces type IV pili for attachment to the insoluble substrates. Common metal-reducing bacterium. This organism, similar to what is observed in Geobacteria sulfurreducens, couples the oxidation of organic molecules to the reduction of iron by using insoluble Fe (III) as an electron acceptor under anaerobic conditions. This bacterium plays an imporant part of the nutrient cycling in aquatic environments. The cell can also use uranium and plutonium, therefore, this organism and may be important for the bioremediation of contaminated waste sites.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007948:3541987:355217735521773553040864Polaromonas sp. JS666, complete genomerestriction endonuclease1e-69263
NC_013959:2449315:245699324569932457841849Sideroxydans lithotrophicus ES-1 chromosome, complete genomerestriction endonuclease1e-66253
NC_002939:1480474:1494206149420614952521047Geobacter sulfurreducens PCA, complete genomeMrr restriction system protein, putative5e-64244
NC_014307:1:355153551536378864Ralstonia solanacearum CFBP2957 chromosome, complete genomeendonuclease4e-62238
NC_015563:3266004:3281764328176432829631200Delftia sp. Cs1-4 chromosome, complete genomerestriction endonuclease1e-61237
NC_010002:4287439:429449442944944295435942Delftia acidovorans SPH-1, complete genomerestriction endonuclease9e-61234
NC_017075:3165858:318021731802173181116900Rubrivivax gelatinosus IL144, complete genomerestriction endonuclease1e-60234
NC_015740:1594376:160040016004001601296897Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDNA topoisomerase I: restriction endonuclease1e-59230
NC_009434:1743696:174956217495621750458897Pseudomonas stutzeri A1501, complete genomeDNA topoisomerase I: restriction endonuclease5e-59228
NC_003295:3688000:369251136925113693356846Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE PROTEIN4e-55215
NC_005139:1784000:181899718189971819854858Vibrio vulnificus YJ016 chromosome I, complete sequenceprobable transmembrane protein4e-44179
NC_006138:1571878:1585047158504715861681122Desulfotalea psychrophila LSv54, complete genomehypothetical protein4e-39162
NC_017271:4852351:485984248598424860678837Xanthomonas campestris pv. raphani 756C chromosome, completerestriction endonuclease4e-30132
NC_010688:4991410:500154050015405002376837Xanthomonas campestris pv. campestris, complete genomehypothetical protein5e-30132
NC_007508:5093365:510339051033905103905516Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein1e-28127
NC_015572:4618467:463444146344414635235795Methylomonas methanica MC09 chromosome, complete genomerestriction endonuclease2e-25116
NC_014394:1594071:160024216002421601222981Gallionella capsiferriformans ES-2 chromosome, complete genomerestriction endonuclease8e-24111
NC_014931:4490526:450060745006074501563957Variovorax paradoxus EPS chromosome, complete genomerestriction endonuclease3e-22106
NC_007908:1946902:195284919528491953775927Rhodoferax ferrireducens T118, complete genomerestriction endonuclease1e-20100
NC_011662:535613:550402550402551355954Thauera sp. MZ1T, complete genomerestriction endonuclease5e-2099
NC_011761:2457560:2462775246277524640971323Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completerestriction endonuclease5e-1995.5
NC_015942:403296:412124412124413035912Acidithiobacillus ferrivorans SS3 chromosome, complete genomerestriction endonuclease3e-1892.8
NC_012491:3704000:371332737133273714043717Brevibacillus brevis NBRC 100599, complete genomehypothetical protein7e-1788.6
NC_008346:1117802:1126703112670311279681266Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeRestriction endonuclease-like protein2e-1584
NC_010678:114000:123313123313124284972Ralstonia pickettii 12J chromosome 2, complete sequenceDNA topoisomerase type IA zn finger domain protein2e-1583.6
NC_012857:557911:567107567107568078972Ralstonia pickettii 12D chromosome 2, complete genomeDNA topoisomerase type IA zn finger domain protein2e-1583.6
NC_010682:1593108:1593108159310815955072400Ralstonia pickettii 12J chromosome 1, complete sequencerestriction endonuclease1e-1274.7
NC_012108:4454705:446735944673594468132774Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein1e-0964.3
NC_012914:5446366:544982354498235450401579Paenibacillus sp. JDR-2, complete genomerestriction endonuclease2e-0963.5
NC_011206:2447905:2459868245986824620872220Acidithiobacillus ferrooxidans ATCC 53993, complete genomeDNA topoisomerase type IA zn finger domain protein5e-0962.4
NC_016818:3736213:3745548374554837471791632Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completerestriction endonuclease1e-0861.2
NC_007519:2773000:279118127911812792122942Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein6e-0858.9
NC_016629:3789554:381560438156043816497894Desulfovibrio africanus str. Walvis Bay chromosome, completerestriction endonuclease8e-0858.5
NC_013157:1:1577715777171501374Methanocaldococcus fervens AG86 plasmid pMEFER01, completerestriction endonuclease8e-0858.5
NC_015388:2143329:215029721502972150755459Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeDNA topoisomerase type IA zn finger domain protein1e-0757.8
NC_008340:1303607:131945513194551319757303Alkalilimnicola ehrlichei MLHE-1, complete genome2e-0757.4
NC_014323:3195178:3203259320325932048661608Herbaspirillum seropedicae SmR1 chromosome, complete genomemrr restriction system protein2e-0757
NC_011979:3112911:313091931309193131440522Geobacter sp. FRC-32, complete genomeDNA topoisomerase type IA zn finger domain protein2e-0756.6
NC_019977:1245894:1262204126220412649452742Methanomethylovorans hollandica DSM 15978, complete genomeputative endonuclease related to Holliday junction resolvase5e-0755.8
NC_015573:2063925:206392520639252064596672Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomerestriction endonuclease4e-0755.8
NC_004459:2443000:248811324881132488760648Vibrio vulnificus CMCP6 chromosome I, complete sequenceProbable endonuclease4e-0755.8
NC_008700:367949:378604378604379386783Shewanella amazonensis SB2B, complete genomeDNA topoisomerase I6e-0755.5
NC_012028:514000:5181755181755195391365Halorubrum lacusprofundi ATCC 49239 chromosome 2, complete genomerestriction endonuclease7e-0755.1
NC_011146:2304475:231717723171772317869693Geobacter bemidjiensis Bem, complete genomeNERD domain protein7e-0755.1
NC_008260:1885969:189899118989911899701711Alcanivorax borkumensis SK2, complete genomehypothetical protein1e-0654.7
NC_011002:772243:7823887823887848052418Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative restriction endonuclease1e-0654.7
NC_011586:268927:2800162800162820342019Acinetobacter baumannii AB0057 chromosome, complete genomeDNA topoisomerase I1e-0654.7
NC_015379:2417312:2455860245586024578752016Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,DNA topoisomerase (DNA topoisomerase III)9e-0754.7
NC_019902:3397170:340366034036603404445786Thioalkalivibrio nitratireducens DSM 14787, complete genomeNERD domain protein1e-0654.3
NC_007498:357484:366565366565367332768Pelobacter carbinolicus DSM 2380, complete genometopoisomerase-associated Zn-finger domain protein2e-0653.9
NC_009439:4404942:441342944134294414199771Pseudomonas mendocina ymp, complete genomeNERD domain-containing protein2e-0653.5
NC_019976:1:1002510025122742250Natronococcus occultus SP4 plasmid 2, complete sequencerestriction endonuclease3e-0653.1
NC_014220:1670000:168241616824161683108693Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomerestriction endonuclease5e-0652.4
NC_010120:2055803:2072374207237420746202247Neisseria meningitidis 053442, complete genomeDNA topoisomerase I7e-0652
NC_011415:4767892:477854947785494779370822Escherichia coli SE11 chromosome, complete genomeputative restriction endonuclease7e-0652
NC_014924:3334386:3343893334389333456081716Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomerestriction endonuclease7e-0652
NC_013016:2041890:2058461205846120607672307Neisseria meningitidis alpha14 chromosome, complete genomeDNA topoisomerase I6e-0652
NC_017501:121902:1250161250161273222307Neisseria meningitidis 8013, complete genomeDNA topoisomerase I (Omega-protein; relaxing enzyme; untwisting enzyme; swivelase)6e-0652
NC_017512:2116295:2132864213286421351702307Neisseria meningitidis WUE 2594, complete genomeDNA topoisomerase I (Omega-protein; relaxing enzyme; untwisting enzyme; swivelase)6e-0652
NC_017513:115870:1189841189841212902307Neisseria meningitidis G2136 chromosome, complete genomeDNA topoisomerase I6e-0652
NC_010067:4149298:414877541487754149338564Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-0651.6