Pre_GI: BLASTN Hits

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Query: NC_007492:6372900 Pseudomonas fluorescens PfO-1, complete genome

Start: 6372900, End: 6435843, Length: 62944

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007005:60567656056765608605229288Pseudomonas syringae pv. syringae B728a, complete genome07904BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome06855BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome06686BLASTN svgBLASTP svg
NC_009512:59209605920960595518534226Pseudomonas putida F1, complete genome06663BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome06573BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete01421BLASTN svgBLASTP svg
NC_002516:6255854*6255854627999924146Pseudomonas aeruginosa PAO1, complete genome0981BLASTN svgBLASTP svg
NC_008027:58427405842740587100528266Pseudomonas entomophila L48, complete genome0928BLASTN svgBLASTP svg
NC_021150:5234000*5234000526129527296Azotobacter vinelandii CA6, complete genome0839BLASTN svgBLASTP svg
NC_012560:5276000*5276000530340327404Azotobacter vinelandii DJ, complete genome0839BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome0801BLASTN svgBLASTP svg
NC_007384:40950164095016412229027275Shigella sonnei Ss046, complete genome0793BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome0793BLASTN svgBLASTP svg
NC_015572:49164304916430495009933670Methylomonas methanica MC09 chromosome, complete genome2e-129472BLASTN svgBLASTP svg
NC_005966:159232*15923218289723666Acinetobacter sp. ADP1, complete genome1e-75293BLASTN svgBLASTP svg
NC_021150:5298500*5298500533099932500Azotobacter vinelandii CA6, complete genome2e-46196BLASTN svgBLASTP svg
NC_002488:1099975*1099975114540245428Xylella fastidiosa 9a5c, complete genome7e-43184BLASTN svgBLASTP svg
NC_005773:20800020800023117523176Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-38168BLASTN svgBLASTP svg
NC_009092:4585784*4585784461549929716Shewanella loihica PV-4, complete genome4e-32149BLASTN svgBLASTP svg
NC_004757:230541*23054125274022200Nitrosomonas europaea ATCC 19718, complete genome3e-30143BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome4e-26129BLASTN svgBLASTP svg
NC_003295:19935419935423823938886Ralstonia solanacearum GMI1000, complete genome6e-25125BLASTN svgBLASTP svg
NC_009648:4497749*4497749452411726369Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome6e-22115BLASTN svgBLASTP svg
NC_007005:10362431036243106363927397Pseudomonas syringae pv. syringae B728a, complete genome6e-22115BLASTN svgBLASTP svg
NC_018750:5399316*5399316541712617811Streptomyces venezuelae ATCC 10712, complete genome9e-21111BLASTN svgBLASTP svg
NC_021177:5697210*5697210572187724668Streptomyces fulvissimus DSM 40593, complete genome9e-21111BLASTN svgBLASTP svg
NC_015589:37118213711821375793046110Desulfotomaculum ruminis DSM 2154 chromosome, complete genome4e-20109BLASTN svgBLASTP svg
NC_015565:27365002736500277293936440Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete4e-20109BLASTN svgBLASTP svg
NC_014228:4408500*4408500443149923000Xenorhabdus nematophila ATCC 19061, complete genome4e-20109BLASTN svgBLASTP svg
NC_014210:397922*39792241759919678Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-19107BLASTN svgBLASTP svg
NC_008618:1804610*1804610183073726128Bifidobacterium adolescentis ATCC 15703, complete genome1e-19107BLASTN svgBLASTP svg
NC_010804:78222278222281165029429Burkholderia multivorans ATCC 17616 chromosome 1, complete6e-19105BLASTN svgBLASTP svg
NC_015222:386000*38600040759921600Nitrosomonas sp. AL212 chromosome, complete genome6e-19105BLASTN svgBLASTP svg
NC_006677:1431500*1431500145622224723Gluconobacter oxydans 621H, complete genome9e-18101BLASTN svgBLASTP svg
NC_019673:81143768114376813609921724Saccharothrix espanaensis DSM 44229 complete genome3e-1799.6BLASTN svgBLASTP svg
NC_015376:11850001185000120456219563Burkholderia gladioli BSR3 chromosome chromosome 2, complete1e-1697.6BLASTN svgBLASTP svg
NC_008554:3177723*3177723320256524843Syntrophobacter fumaroxidans MPOB, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_014752:131994*13199415436422371Neisseria lactamica ST-640, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_013714:22038542203854222231018457Bifidobacterium dentium Bd1, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_002927:5327094*5327094535399926906Bordetella bronchiseptica RB50, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_008009:5139896*5139896517800338108Acidobacteria bacterium Ellin345, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_010498:41669034166903419347126569Escherichia coli SMS-3-5, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_011750:44905734490573451714226570Escherichia coli IAI39 chromosome, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_011751:43739614373961440053726577Escherichia coli UMN026 chromosome, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_013715:14459591445959146809922141Rothia mucilaginosa DY-18, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_015968:4790239*4790239481349923261Enterobacter asburiae LF7a chromosome, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete1e-1387.7BLASTN svgBLASTP svg
NC_010002:33577523357752338379626045Delftia acidovorans SPH-1, complete genome5e-1385.7BLASTN svgBLASTP svg
NC_010501:1286971*1286971131065623686Pseudomonas putida W619, complete genome5e-1385.7BLASTN svgBLASTP svg
NC_018720:18782011878201190278524585Bifidobacterium asteroides PRL2011 chromosome, complete genome5e-1385.7BLASTN svgBLASTP svg
NC_013093:71746367174636719886524230Actinosynnema mirum DSM 43827, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_012912:47377034737703476071123009Dickeya zeae Ech1591, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_013203:1447340*1447340147021422875Atopobium parvulum DSM 20469, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_013037:55878025587802561018522384Dyadobacter fermentans DSM 18053, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_009138:31535763153576318147527900Herminiimonas arsenicoxydans, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_011883:2031222*2031222205221920998Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,1e-1077.8BLASTN svgBLASTP svg
NC_019903:3537545*3537545356034222798Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,5e-1075.8BLASTN svgBLASTP svg
NC_005125:2366778*2366778239059123814Gloeobacter violaceus PCC 7421, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_003919:4568892*4568892459309924208Xanthomonas axonopodis pv. citri str. 306, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_004369:1051013*1051013107385922847Corynebacterium efficiens YS-314, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_004556:531000*53100056678535786Xylella fastidiosa Temecula1, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_007908:11084941108494116189953406Rhodoferax ferrireducens T118, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_010577:530917*53091756659335677Xylella fastidiosa M23, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_014973:24300024300026234519346Geobacter sp. M18 chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_015589:36629636629639209925804Desulfotomaculum ruminis DSM 2154 chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_019897:329945*32994537695547011Thermobacillus composti KWC4 chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_007508:4593446*4593446461871425269Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_007513:513806*51380653756623761Synechococcus sp. CC9902, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_007498:20878112087811212235934549Pelobacter carbinolicus DSM 2380, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_006274:50858605085860510874322884Bacillus cereus E33L, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_005957:5037499*5037499507811440616Bacillus thuringiensis serovar konkukian str. 97-27, complete3e-0869.9BLASTN svgBLASTP svg
NC_004722:5194000*5194000525118457185Bacillus cereus ATCC 14579, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_003997:5032969*5032969507209939131Bacillus anthracis str. Ames, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_003909:4996783*4996783505271855936Bacillus cereus ATCC 10987, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_007516:1974500*1974500199561621117Synechococcus sp. CC9605, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_007530:5033095*5033095507221139117Bacillus anthracis str. 'Ames Ancestor', complete genome3e-0869.9BLASTN svgBLASTP svg
NC_008319:20077522007752203322125470Synechococcus sp. CC9311, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_014335:49695494969549499246722919Bacillus cereus biovar anthracis str. CI chromosome, complete3e-0869.9BLASTN svgBLASTP svg
NC_012472:50551845055184507809922916Bacillus cereus 03BB102, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_011772:5158680*5158680520959950920Bacillus cereus G9842, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_010645:3720501*3720501374549924999Bordetella avium 197N, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_010407:20384992038499205674718249Clavibacter michiganensis subsp. sepedonicus chromosome, complete3e-0869.9BLASTN svgBLASTP svg
NC_009052:50899635089963511024820286Shewanella baltica OS155, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_008600:5046000*5046000510070354704Bacillus thuringiensis str. Al Hakam, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_020260:3931567*3931567395659925033Cronobacter sakazakii Sp291, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_010717:4851000*4851000487555824559Xanthomonas oryzae pv. oryzae PXO99A, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_008825:4025705*4025705405199926295Methylibium petroleiphilum PM1, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_015222:31371673137167315861921453Nitrosomonas sp. AL212 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_012108:3965433*3965433398469319261Desulfobacterium autotrophicum HRM2, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010557:20784620784622851620671Burkholderia ambifaria MC40-6 chromosome 3, complete sequence2e-0663.9BLASTN svgBLASTP svg
NC_007951:4608560*4608560463659128032Burkholderia xenovorans LB400 chromosome 1, complete sequence7e-0661.9BLASTN svgBLASTP svg
NC_008781:2575213*2575213259673521523Polaromonas naphthalenivorans CJ2, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_013202:59278592789672237445Halomicrobium mukohataei DSM 12286, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_014363:114239*11423917409959861Olsenella uli DSM 7084 chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_014733:2851984*2851984287799926016Methylovorus sp. MP688 chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_015942:63440*634408731823879Acidithiobacillus ferrivorans SS3 chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_007517:16766041676604171020033597Geobacter metallireducens GS-15, complete genome7e-0661.9BLASTN svgBLASTP svg