Pre_GI: BLASTN Hits

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Query: NC_007492:4310828 Pseudomonas fluorescens PfO-1, complete genome

Start: 4310828, End: 4337167, Length: 26340

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome0704BLASTN svgBLASTP svg
NC_020209:945000*94500096809923100Pseudomonas poae RE*1-1-14, complete genome3e-173617BLASTN svgBLASTP svg
NC_004129:22017802201780222535423575Pseudomonas fluorescens Pf-5, complete genome3e-139504BLASTN svgBLASTP svg
NC_015733:1943385*1943385196159918215Pseudomonas putida S16 chromosome, complete genome7e-103383BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome6e-97363BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome2e-87331BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome5e-79303BLASTN svgBLASTP svg
NC_007005:2191500*2191500223078139282Pseudomonas syringae pv. syringae B728a, complete genome5e-79303BLASTN svgBLASTP svg
NC_007492:26293502629350265266523316Pseudomonas fluorescens PfO-1, complete genome2e-72281BLASTN svgBLASTP svg
NC_010501:18688881868888190527536388Pseudomonas putida W619, complete genome2e-69272BLASTN svgBLASTP svg
NC_015410:26985722698572274463646065Pseudomonas mendocina NK-01 chromosome, complete genome4e-67264BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome1e-64256BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome1e-64256BLASTN svgBLASTP svg
NC_002947:61236086123608614375120144Pseudomonas putida KT2440, complete genome4e-64254BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome2e-63252BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome3e-52214BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete8e-41176BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome1e-36163BLASTN svgBLASTP svg
CU928145:39585723958572397962121050Escherichia coli 55989 chromosome, complete genome1e-24123BLASTN svgBLASTP svg
NC_009778:41880004188000423044042441Enterobacter sakazakii ATCC BAA-894, complete genome1e-24123BLASTN svgBLASTP svg
NC_010943:24659762465976248809922124Stenotrophomonas maltophilia K279a, complete genome1e-24123BLASTN svgBLASTP svg
NC_011748:39585723958572397962121050Escherichia coli 55989, complete genome1e-24123BLASTN svgBLASTP svg
NC_007492:27710212771021280204831028Pseudomonas fluorescens PfO-1, complete genome9e-19103BLASTN svgBLASTP svg
NC_004578:63347356334735636397929245Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-18101BLASTN svgBLASTP svg
NC_007492:17355951735595175753521941Pseudomonas fluorescens PfO-1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007434:34529853452985347302220038Burkholderia pseudomallei 1710b chromosome I, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_014924:32705473270547329089620350Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007963:1370903*1370903139119320291Chromohalobacter salexigens DSM 3043, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008782:13080071308007132716219156Acidovorax sp. JS42, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007404:13880491388049141186723819Thiobacillus denitrificans ATCC 25259, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007651:16625581662558168442221865Burkholderia thailandensis E264 chromosome I, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_008060:1182378*1182378120591323536Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_008542:1727000*1727000174809921100Burkholderia cenocepacia HI2424 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_008789:16690821669082171259143510Halorhodospira halophila SL1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010508:1705500*1705500172769222193Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_014541:11659911165991120221836228Ferrimonas balearica DSM 9799 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009074:2970435*2970435301145841024Burkholderia pseudomallei 668 chromosome I, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_007492:20357612035761205955323793Pseudomonas fluorescens PfO-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012791:20529232052923208497632054Variovorax paradoxus S110 chromosome 1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008344:1*13873538735Nitrosomonas eutropha C91, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007510:943068*94306896450321436Burkholderia sp. 383 chromosome 1, complete sequence8e-0763.9BLASTN svgBLASTP svg