Pre_GI: BLASTN Hits

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Query: NC_007492:2994036 Pseudomonas fluorescens PfO-1, complete genome

Start: 2994036, End: 3023113, Length: 29078

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004578:49400004940000496327423275Pseudomonas syringae pv. tomato str. DC3000, complete genome0910BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome0841BLASTN svgBLASTP svg
NC_015379:27513422751342277455823217Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,0708BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome1e-150541BLASTN svgBLASTP svg
NC_002516:21131862113186213336720182Pseudomonas aeruginosa PAO1, complete genome2e-143517BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome5e-141509BLASTN svgBLASTP svg
NC_007492:23107932310793233159920807Pseudomonas fluorescens PfO-1, complete genome2e-128468BLASTN svgBLASTP svg
NC_009439:91853491853494240823875Pseudomonas mendocina ymp, complete genome3e-117430BLASTN svgBLASTP svg
NC_015740:11063311063313313122499Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete8e-115422BLASTN svgBLASTP svg
NC_004578:61386696138669616309624428Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-91343BLASTN svgBLASTP svg
NC_009439:10117410117412533624163Pseudomonas mendocina ymp, complete genome6e-91343BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome6e-91343BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome9e-84319BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome3e-59238BLASTN svgBLASTP svg
NC_008027:55850755850758141922913Pseudomonas entomophila L48, complete genome6e-57230BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome2e-50208BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome9e-50206BLASTN svgBLASTP svg
NC_008027:55764585576458559851822061Pseudomonas entomophila L48, complete genome9e-44186BLASTN svgBLASTP svg
NC_014532:17139871713987173773623750Halomonas elongata DSM 2581, complete genome3e-43184BLASTN svgBLASTP svg
NC_008027:4280000*4280000430482424825Pseudomonas entomophila L48, complete genome7e-32147BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome7e-29137BLASTN svgBLASTP svg
NC_009512:56325915632591568653153941Pseudomonas putida F1, complete genome3e-28135BLASTN svgBLASTP svg
NC_003911:253400*25340027913725738Silicibacter pomeroyi DSS-3, complete genome4e-27131BLASTN svgBLASTP svg
NC_015856:1271295*1271295129109919805Collimonas fungivorans Ter331 chromosome, complete genome3e-25125BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-22115BLASTN svgBLASTP svg
NC_015675:2567000*2567000258988822889Mesorhizobium opportunistum WSM2075 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_002947:4293252*4293252431746924218Pseudomonas putida KT2440, complete genome1e-18103BLASTN svgBLASTP svg
NC_004578:27974932797493281782820336Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010524:93319193319195763824448Leptothrix cholodnii SP-6, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_003063:20593112059311208899929689Agrobacterium tumefaciens str. C58 chromosome linear, complete6e-1487.7BLASTN svgBLASTP svg
NC_019673:89541889541891638420967Saccharothrix espanaensis DSM 44229 complete genome6e-1487.7BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_003305:112033020330Agrobacterium tumefaciens str. C58 chromosome linear, complete6e-1487.7BLASTN svgBLASTP svg
NC_009952:52645652645655182825373Dinoroseobacter shibae DFL 12, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014923:2439197*2439197246272623530Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete4e-1281.8BLASTN svgBLASTP svg
NC_010002:42566514256651428631629666Delftia acidovorans SPH-1, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_013282:551219*55121958904737829Cronobacter turicensis, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_019973:2417000*2417000243959922600Mesorhizobium australicum WSM2073, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_013169:21045972104597212575721161Kytococcus sedentarius DSM 20547, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004129:31230003123000314059917600Pseudomonas fluorescens Pf-5, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018750:4311300*4311300432914617847Streptomyces venezuelae ATCC 10712, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_007760:47510004751000477056419565Anaeromyxobacter dehalogenans 2CP-C, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_005810:40453034045303406820222900Yersinia pestis biovar Microtus str. 91001, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_012724:19147401914740194049525756Burkholderia glumae BGR1 chromosome 1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015563:33090973309097334276333667Delftia sp. Cs1-4 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015848:31756923175692319911823427Mycobacterium canettii CIPT 140010059, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019950:3139865*3139865316350123637Mycobacterium canettii CIPT 140060008 complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011894:30299643029964307745447491Methylobacterium nodulans ORS 2060, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_007802:3575739*3575739362449148753Jannaschia sp. CCS1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_002516:24363042436304246509928796Pseudomonas aeruginosa PAO1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008043:499399*49939952304123643Silicibacter sp. TM1040 mega plasmid, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_011145:47975484797548481912621579Anaeromyxobacter sp. K, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018644:516157*51615755292036764Alpha proteobacterium HIMB59 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020063:33525163352516337629223777Enterobacteriaceae bacterium strain FGI 57, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006511:682863*68286370873225870Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC9e-0763.9BLASTN svgBLASTP svg
NC_006905:23552902355290237961224323Salmonella enterica subsp. enterica serovar Choleraesuis str9e-0763.9BLASTN svgBLASTP svg
NC_011083:23750612375061241289137831Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,9e-0763.9BLASTN svgBLASTP svg
NC_013850:4829455*4829455485950430050Klebsiella variicola At-22 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015379:44268274426827444459917773Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,9e-0763.9BLASTN svgBLASTP svg
NC_015954:10514401051440107644325004Halophilic archaeon DL31 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_003198:22978372297837232227924443Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0661.9BLASTN svgBLASTP svg
NC_004631:685357*68535771085325497Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-0661.9BLASTN svgBLASTP svg
NC_007948:5026122*5026122504843922318Polaromonas sp. JS666, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008740:41090004109000413081821819Marinobacter aquaeolei VT8, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010067:63268363268365799725315Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-0661.9BLASTN svgBLASTP svg
NC_010102:683444*68344472210838665Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-0661.9BLASTN svgBLASTP svg
NC_011080:23426722342672236709924428Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-0661.9BLASTN svgBLASTP svg
NC_011149:22945002294500231681122312Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-0661.9BLASTN svgBLASTP svg
NC_012848:32088332088334425923377Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,3e-0661.9BLASTN svgBLASTP svg
NC_014532:20660742066074209060724534Halomonas elongata DSM 2581, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_020126:7661551*7661551768494523395Myxococcus stipitatus DSM 14675, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020260:33558143355814338153125718Cronobacter sakazakii Sp291, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003197:23274742327474236419536722Salmonella typhimurium LT2, complete genome3e-0661.9BLASTN svgBLASTP svg