Pre_GI: BLASTN Hits

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Query: NC_007492:2310793 Pseudomonas fluorescens PfO-1, complete genome

Start: 2310793, End: 2331599, Length: 20807

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome2e-136494BLASTN svgBLASTP svg
NC_008027:55764585576458559851822061Pseudomonas entomophila L48, complete genome5e-134486BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome3e-129470BLASTN svgBLASTP svg
NC_008027:55850755850758141922913Pseudomonas entomophila L48, complete genome1e-128468BLASTN svgBLASTP svg
NC_007492:29940362994036302311329078Pseudomonas fluorescens PfO-1, complete genome1e-128468BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome7e-127462BLASTN svgBLASTP svg
NC_015740:11063311063313313122499Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-124454BLASTN svgBLASTP svg
NC_008463:282565*28256532073638172Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-108400BLASTN svgBLASTP svg
NC_009439:10117410117412533624163Pseudomonas mendocina ymp, complete genome5e-103383BLASTN svgBLASTP svg
NC_004578:61386696138669616309624428Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-94353BLASTN svgBLASTP svg
NC_004578:49400004940000496327423275Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-83317BLASTN svgBLASTP svg
NC_009439:91853491853494240823875Pseudomonas mendocina ymp, complete genome2e-80307BLASTN svgBLASTP svg
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome6e-78299BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome4e-76293BLASTN svgBLASTP svg
NC_004578:27974932797493281782820336Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-35159BLASTN svgBLASTP svg
NC_015733:35958823595882362033824457Pseudomonas putida S16 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008027:4280000*4280000430482424825Pseudomonas entomophila L48, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020064:3157656*3157656318828830633Serratia marcescens FGI94, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_004129:31230003123000314059917600Pseudomonas fluorescens Pf-5, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010170:1661915*1661915168523723323Bordetella petrii, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007963:2512478*2512478253370821231Chromohalobacter salexigens DSM 3043, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012791:40790624079062410253023469Variovorax paradoxus S110 chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015379:31755003175500319347517976Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_015563:33090973309097334276333667Delftia sp. Cs1-4 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006905:3780000*3780000380296822969Salmonella enterica subsp. enterica serovar Choleraesuis str6e-0763.9BLASTN svgBLASTP svg
NC_006905:39427533942753396819425442Salmonella enterica subsp. enterica serovar Choleraesuis str6e-0763.9BLASTN svgBLASTP svg
NC_011149:10775891077589110031022722Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-0763.9BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-0763.9BLASTN svgBLASTP svg
NC_011149:46774124677412471244835037Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-0763.9BLASTN svgBLASTP svg
NC_013716:27645502764550279838233833Citrobacter rodentium ICC168, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013716:5141269*5141269517008828820Citrobacter rodentium ICC168, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015566:2039431*2039431206952030090Serratia sp. AS12 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015567:2039443*2039443205864519203Serratia sp. AS9 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010002:48901924890192491000619815Delftia acidovorans SPH-1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015224:61080761080762877617970Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-0661.9BLASTN svgBLASTP svg
NC_015424:24625222462522248308820567Aeromonas veronii B565 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015563:26566282656628268487728250Delftia sp. Cs1-4 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_015138:32238632238634172219337Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-0560BLASTN svgBLASTP svg
NC_008752:41477154147715417135323639Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0560BLASTN svgBLASTP svg
NC_008752:38284383828438385232823891Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0560BLASTN svgBLASTP svg
NC_008752:26190326190328210620204Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0560BLASTN svgBLASTP svg
NC_008752:2334511*2334511236012625616Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0560BLASTN svgBLASTP svg