Pre_GI: BLASTN Hits

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Query: NC_007492:2035761 Pseudomonas fluorescens PfO-1, complete genome

Start: 2035761, End: 2059553, Length: 23793

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021150:19652641965264198887523612Azotobacter vinelandii CA6, complete genome01122BLASTN svgBLASTP svg
NC_012560:19652511965251198886223612Azotobacter vinelandii DJ, complete genome01122BLASTN svgBLASTP svg
NC_005773:38514333851433386927817846Pseudomonas syringae pv. phaseolicola 1448A, complete genome01045BLASTN svgBLASTP svg
NC_007005:40623114062311408347221162Pseudomonas syringae pv. syringae B728a, complete genome0993BLASTN svgBLASTP svg
NC_004578:21859072185907220851022604Pseudomonas syringae pv. tomato str. DC3000, complete genome0983BLASTN svgBLASTP svg
NC_002927:506183*50618356896162779Bordetella bronchiseptica RB50, complete genome5e-119436BLASTN svgBLASTP svg
NC_014541:21227882122788214364020853Ferrimonas balearica DSM 9799 chromosome, complete genome6e-109402BLASTN svgBLASTP svg
NC_015422:11637521163752119065526904Alicycliphilus denitrificans K601 chromosome, complete genome4e-107396BLASTN svgBLASTP svg
NC_014910:34584753458475348275724283Alicycliphilus denitrificans BC chromosome, complete genome4e-107396BLASTN svgBLASTP svg
NC_011992:10389851038985105881219828Acidovorax ebreus TPSY, complete genome1e-97365BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome1e-97365BLASTN svgBLASTP svg
NC_008782:11367321136732115655319822Acidovorax sp. JS42, complete genome3e-95357BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome1e-88335BLASTN svgBLASTP svg
NC_007298:77872377872382009941377Dechloromonas aromatica RCB, complete genome2e-69272BLASTN svgBLASTP svg
NC_009092:2282437*2282437232744145005Shewanella loihica PV-4, complete genome1e-51212BLASTN svgBLASTP svg
NC_012848:32088332088334425923377Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,7e-44186BLASTN svgBLASTP svg
NC_008095:68773886877388689529417907Myxococcus xanthus DK 1622, complete genome2e-28135BLASTN svgBLASTP svg
NC_013422:20044782004478202318018703Halothiobacillus neapolitanus c2, complete genome6e-26127BLASTN svgBLASTP svg
NC_007492:27710212771021280204831028Pseudomonas fluorescens PfO-1, complete genome6e-26127BLASTN svgBLASTP svg
NC_020126:78964477896447792073324287Myxococcus stipitatus DSM 14675, complete genome2e-25125BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_007492:26293502629350265266523316Pseudomonas fluorescens PfO-1, complete genome9e-22113BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome3e-21111BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_009052:25123732512373255632743955Shewanella baltica OS155, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_009379:43540443540445957024167Polynucleobacter sp. QLW-P1DMWA-1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_005085:31165143116514313924422731Chromobacterium violaceum ATCC 12472, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009439:79449879449881473720240Pseudomonas mendocina ymp, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015410:96952696952699007820553Pseudomonas mendocina NK-01 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020209:45495634549563457659927037Pseudomonas poae RE*1-1-14, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008278:5855401*5855401589499139591Frankia alni ACN14a, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004578:11537381153738117268818951Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010501:25118872511887254627834392Pseudomonas putida W619, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013851:31669693166969319361626648Allochromatium vinosum DSM 180 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014541:29785002978500299617417675Ferrimonas balearica DSM 9799 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015410:22588002258800228509926300Pseudomonas mendocina NK-01 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012660:33203303320330335044730118Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008570:1852286*1852286187535523070Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002937:19157871915787193430218516Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete7e-1073.8BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009997:26350252635025266689331869Shewanella baltica OS195, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008751:29882352988235301490126667Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003919:28240002824000285062126622Xanthomonas axonopodis pv. citri str. 306, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007519:3240864*3240864326641325550Desulfovibrio alaskensis G20 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018524:4988810*4988810503746448655Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009664:4423829*44238294686013262185Kineococcus radiotolerans SRS30216, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008577:14896431489643151651426872Shewanella sp. ANA-3 chromosome 1, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_008570:23650023650025959923100Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005773:95174495174497731525572Pseudomonas syringae pv. phaseolicola 1448A, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007645:35811143581114360707925966Hahella chejuensis KCTC 2396, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007777:30009413000941302809927159Frankia sp. CcI3, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010814:90319990319992459921401Geobacter lovleyi SZ, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011883:2680380*2680380271559935220Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,7e-0763.9BLASTN svgBLASTP svg
NC_007508:2941889*2941889296435422466Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007519:27730002773000280551732518Desulfovibrio alaskensis G20 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007778:1053462*1053462107959926138Rhodopseudomonas palustris HaA2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008321:39644143964414398859924186Shewanella sp. MR-4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008577:41833614183361420632622966Shewanella sp. ANA-3 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009778:56700056700060530938310Enterobacter sakazakii ATCC BAA-894, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010804:28086762808676283109922424Burkholderia multivorans ATCC 17616 chromosome 1, complete3e-0661.9BLASTN svgBLASTP svg
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020260:603796*60379665197748182Cronobacter sakazakii Sp291, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005085:41572574157257418052123265Chromobacterium violaceum ATCC 12472, complete genome3e-0661.9BLASTN svgBLASTP svg