Pre_GI: BLASTN Hits

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Query: NC_007492:1735595 Pseudomonas fluorescens PfO-1, complete genome

Start: 1735595, End: 1757535, Length: 21941

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004129:18487011848701187545426754Pseudomonas fluorescens Pf-5, complete genome03913BLASTN svgBLASTP svg
NC_009512:1691930*1691930171807626147Pseudomonas putida F1, complete genome01756BLASTN svgBLASTP svg
NC_010501:4080937*4080937410672725791Pseudomonas putida W619, complete genome01703BLASTN svgBLASTP svg
NC_002947:49314764931476495751626041Pseudomonas putida KT2440, complete genome01685BLASTN svgBLASTP svg
NC_013851:33002783300278332129021013Allochromatium vinosum DSM 180 chromosome, complete genome8e-59236BLASTN svgBLASTP svg
NC_007508:2234080*2234080225476820689Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome3e-52214BLASTN svgBLASTP svg
NC_003919:2233000*2233000226150128502Xanthomonas axonopodis pv. citri str. 306, complete genome5e-51210BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome2e-44188BLASTN svgBLASTP svg
NC_010688:2532929*2532929255774124813Xanthomonas campestris pv. campestris, complete genome7e-44186BLASTN svgBLASTP svg
NC_003902:2211790*2211790223409922310Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-41178BLASTN svgBLASTP svg
NC_012559:73185973185975630324445Laribacter hongkongensis HLHK9, complete genome6e-32147BLASTN svgBLASTP svg
NC_010512:86693286693289209925168Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence3e-27131BLASTN svgBLASTP svg
NC_012808:594000*59400061960225603Methylobacterium extorquens AM1, complete genome5e-26127BLASTN svgBLASTP svg
NC_011757:748223*74822379542247200Methylobacterium chloromethanicum CM4, complete genome5e-26127BLASTN svgBLASTP svg
NC_014366:1814000*1814000183684822849Gamma proteobacterium HdN1, complete genome1e-23119BLASTN svgBLASTP svg
NC_007492:27710212771021280204831028Pseudomonas fluorescens PfO-1, complete genome3e-21111BLASTN svgBLASTP svg
NC_014562:18442681844268187632632059Pantoea vagans C9-1 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_019940:293476*29347631150418029Thioflavicoccus mobilis 8321 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_013722:15778181577818160047922662Xanthomonas albilineans, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_009792:26887472688747271473325987Citrobacter koseri ATCC BAA-895, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-1487.7BLASTN svgBLASTP svg
NC_010515:1618093*1618093165515937067Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014562:1772842*1772842180089428053Pantoea vagans C9-1 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-1281.8BLASTN svgBLASTP svg
NC_015379:67145456714545674216027616Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1179.8BLASTN svgBLASTP svg
NC_015138:49059354905935493092624992Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_014500:30717643071764309400622243Dickeya dadantii 3937 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_020063:2785652*2785652280843522784Enterobacteriaceae bacterium strain FGI 57, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_020911:2921925*2921925299019968275Octadecabacter antarcticus 307, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007492:39543453954345399809943755Pseudomonas fluorescens PfO-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007298:77872377872382009941377Dechloromonas aromatica RCB, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010002:66169666169668889327198Delftia acidovorans SPH-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-0971.9BLASTN svgBLASTP svg
NC_015563:60678360678362671319931Delftia sp. Cs1-4 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015666:1849618*1849618187832428707Halopiger xanaduensis SH-6 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007946:25874725874728282624080Escherichia coli UTI89, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008253:25705925705928215125093Escherichia coli 536, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008563:258725*25872528280524081Escherichia coli APEC O1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012559:23095662309566233407924514Laribacter hongkongensis HLHK9, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013223:68562868562871386228235Desulfohalobium retbaense DSM 5692, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009654:3849774*3849774388986740094Marinomonas sp. MWYL1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006177:3192500*3192500321147918980Symbiobacterium thermophilum IAM 14863, complete genome3e-0661.9BLASTN svgBLASTP svg