Query: NC_007492:1193626 Pseudomonas fluorescens PfO-1, complete genome
Start: 1193626, End: 1216997, Length: 23372
Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_011770:3396637 | 3396637 | 3419544 | 22908 | Pseudomonas aeruginosa LESB58, complete genome | 1e-48 | 202 | BLASTN svg | BLASTP svg |
NC_008463:3168837 | 3168837 | 3198149 | 29313 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 1e-48 | 202 | BLASTN svg | BLASTP svg |
NC_020063:2343813 | 2343813 | 2366099 | 22287 | Enterobacteriaceae bacterium strain FGI 57, complete genome | 3e-40 | 174 | BLASTN svg | BLASTP svg |
NC_012880:3645304 | 3645304 | 3666812 | 21509 | Dickeya dadantii Ech703, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_014366:2393702* | 2393702 | 2416894 | 23193 | Gamma proteobacterium HdN1, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_013421:1954915* | 1954915 | 1974100 | 19186 | Pectobacterium wasabiae WPP163, complete genome | 5e-20 | 107 | BLASTN svg | BLASTP svg |
NC_015276:2948923 | 2948923 | 2971244 | 22322 | Marinomonas mediterranea MMB-1 chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_015559:1478114 | 1478114 | 1502896 | 24783 | Marinomonas posidonica IVIA-Po-181 chromosome, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_010067:1300606* | 1300606 | 1321804 | 21199 | Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_009668:46010 | 46010 | 65599 | 19590 | Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_020064:3825916* | 3825916 | 3852923 | 27008 | Serratia marcescens FGI94, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_008786:3681847 | 3681847 | 3700925 | 19079 | Verminephrobacter eiseniae EF01-2, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_009142:6729512 | 6729512 | 6758131 | 28620 | Saccharopolyspora erythraea NRRL 2338, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_002939:1480474* | 1480474 | 1505607 | 25134 | Geobacter sulfurreducens PCA, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_003198:1378457 | 1378457 | 1399126 | 20670 | Salmonella enterica subsp. enterica serovar Typhi str. CT18, | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010102:1388344 | 1388344 | 1415723 | 27380 | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_013716:5201097* | 5201097 | 5276599 | 75503 | Citrobacter rodentium ICC168, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_011149:1429523* | 1429523 | 1498087 | 68565 | Salmonella enterica subsp. enterica serovar Agona str. SL483, | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_009348:1064664* | 1064664 | 1098734 | 34071 | Aeromonas salmonicida subsp. salmonicida A449, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015593:463477* | 463477 | 486707 | 23231 | Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008825:2889933 | 2889933 | 2923162 | 33230 | Methylibium petroleiphilum PM1, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009648:1914621 | 1914621 | 1940599 | 25979 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009664:1434974* | 1434974 | 1457886 | 22913 | Kineococcus radiotolerans SRS30216, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_012522:98567 | 98567 | 122099 | 23533 | Rhodococcus opacus B4, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_012779:3176820* | 3176820 | 3231780 | 54961 | Edwardsiella ictaluri 93-146, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014221:38000* | 38000 | 58889 | 20890 | Truepera radiovictrix DSM 17093 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015968:1709680* | 1709680 | 1732219 | 22540 | Enterobacter asburiae LF7a chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_012912:3853377* | 3853377 | 3896070 | 42694 | Dickeya zeae Ech1591, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015947:223184 | 223184 | 247485 | 24302 | Burkholderia sp. JV3 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007946:1586656 | 1586656 | 1612787 | 26132 | Escherichia coli UTI89, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007492:3332839 | 3332839 | 3354179 | 21341 | Pseudomonas fluorescens PfO-1, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |