Pre_GI: BLASTN Hits

Some Help

Query: NC_007492:1193626 Pseudomonas fluorescens PfO-1, complete genome

Start: 1193626, End: 1216997, Length: 23372

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011770:33966373396637341954422908Pseudomonas aeruginosa LESB58, complete genome1e-48202BLASTN svgBLASTP svg
NC_008463:31688373168837319814929313Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-48202BLASTN svgBLASTP svg
NC_020063:23438132343813236609922287Enterobacteriaceae bacterium strain FGI 57, complete genome3e-40174BLASTN svgBLASTP svg
NC_012880:36453043645304366681221509Dickeya dadantii Ech703, complete genome1e-29139BLASTN svgBLASTP svg
NC_014366:2393702*2393702241689423193Gamma proteobacterium HdN1, complete genome2e-22115BLASTN svgBLASTP svg
NC_013421:1954915*1954915197410019186Pectobacterium wasabiae WPP163, complete genome5e-20107BLASTN svgBLASTP svg
NC_015276:29489232948923297124422322Marinomonas mediterranea MMB-1 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_015559:14781141478114150289624783Marinomonas posidonica IVIA-Po-181 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010067:1300606*1300606132180421199Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete8e-1693.7BLASTN svgBLASTP svg
NC_009668:46010460106559919590Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_020064:3825916*3825916385292327008Serratia marcescens FGI94, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008786:36818473681847370092519079Verminephrobacter eiseniae EF01-2, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009142:67295126729512675813128620Saccharopolyspora erythraea NRRL 2338, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_003198:13784571378457139912620670Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-1177.8BLASTN svgBLASTP svg
NC_010102:13883441388344141572327380Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,5e-1177.8BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-1075.8BLASTN svgBLASTP svg
NC_009348:1064664*1064664109873434071Aeromonas salmonicida subsp. salmonicida A449, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015593:463477*46347748670723231Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete4e-0867.9BLASTN svgBLASTP svg
NC_008825:28899332889933292316233230Methylibium petroleiphilum PM1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009648:19146211914621194059925979Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009664:1434974*1434974145788622913Kineococcus radiotolerans SRS30216, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012522:985679856712209923533Rhodococcus opacus B4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012779:3176820*3176820323178054961Edwardsiella ictaluri 93-146, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014221:38000*380005888920890Truepera radiovictrix DSM 17093 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015968:1709680*1709680173221922540Enterobacter asburiae LF7a chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012912:3853377*3853377389607042694Dickeya zeae Ech1591, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015947:22318422318424748524302Burkholderia sp. JV3 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007946:15866561586656161278726132Escherichia coli UTI89, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome3e-0661.9BLASTN svgBLASTP svg