Pre_GI: BLASTP Hits

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Query: NC_007492:857428:884666 Pseudomonas fluorescens PfO-1, complete genome

Start: 884666, End: 885490, Length: 825

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:926479:944204944204945028825Pseudomonas fluorescens Pf-5, complete genomecysteine-rich domain protein6e-153540
NC_009434:3611738:361173836117383612559822Pseudomonas stutzeri A1501, complete genomeFe-S oxidoreductase9e-137486
NC_014752:1363562:136356213635621364341780Neisseria lactamica ST-640, complete genomehypothetical protein8e-81300
NC_008767:1363288:136497813649781365757780Neisseria meningitidis FAM18, complete genomehypothetical protein6e-80297
NC_013205:747502:764531764531765277747Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,protein of unknown function DUF224 cysteine-rich region domain protein2e-53209
NC_017167:674511:695878695878696624747Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein2e-50199
NC_014622:2477019:248924224892422489970729Paenibacillus polymyxa SC2 chromosome, complete genomeadenine phosphoribosyltransferase7e-49194
NC_004193:375416:394993394993395727735Oceanobacillus iheyensis HTE831, complete genomeglycolate oxidase9e-43173
NC_015957:3342169:334445333444533345205753Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein2e-41169
NC_015930:1397524:140882914088291409596768Lactococcus garvieae ATCC 49156, complete genomeoxidoreductase5e-41167
NC_013235:4091185:409118540911854091934750Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein1e-37157
NC_015683:947048:960965960965961750786Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein4e-37155
NC_017317:944218:958134958134958919786Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein4e-37155
NC_016932:832748:866989866989867774786Corynebacterium pseudotuberculosis 316 chromosome, complete genomeLactate utilization protein A3e-37155
NC_014329:844622:878877878877879662786Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein3e-37155
NC_016781:844613:878868878868879653786Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeLactate utilization protein A3e-37155
NC_017031:863093:878718878718879503786Corynebacterium pseudotuberculosis P54B96 chromosome, completeLactate utilization protein A3e-37155
NC_017300:863898:878773878773879558786Corynebacterium pseudotuberculosis 1002 chromosome, completeLactate utilization protein A3e-37155
NC_017301:863500:878495878495879280786Corynebacterium pseudotuberculosis C231 chromosome, completeLactate utilization protein A3e-37155
NC_017303:863060:878688878688879473786Corynebacterium pseudotuberculosis I19 chromosome, complete genomeLactate utilization protein A3e-37155
NC_017305:863072:878700878700879485786Corynebacterium pseudotuberculosis PAT10 chromosome, completeLactate utilization protein A3e-37155
NC_010473:279948:296382296382297101720Escherichia coli str. K-12 substr. DH10B, complete genomepredicted oxidoreductase4e-36152
NC_000913:303719:320832320832321551720Escherichia coli K12, complete genomepredicted oxidoreductase4e-36152
AC_000091:303719:320832320832321551720Escherichia coli W3110 DNA, complete genomepredicted oxidoreductase4e-36152
NC_012947:3487392:349042934904293491148720Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein4e-36152
NC_009800:349592:372205372205372924720Escherichia coli HS, complete genomecysteine-rich domain protein2e-36152
NC_011415:351810:355690355690356409720Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-36152
NC_015859:370500:374513374513375337825Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein4e-36151
NC_008253:334467:398270398270398989720Escherichia coli 536, complete genomehypothetical protein YkgE7e-36150
NC_007946:289425:341575341575342294720Escherichia coli UTI89, complete genomehypothetical protein YkgE7e-36150
NC_008563:318993:343165343165343884720Escherichia coli APEC O1, complete genomehypothetical protein7e-36150
NC_004431:364000:406102406102406821720Escherichia coli CFT073, complete genomeHypothetical protein ykgE7e-36150
NC_013235:3913000:391523839152383915987750Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein1e-35149
NC_018720:417500:431981431981432799819Bifidobacterium asteroides PRL2011 chromosome, complete genomeFe-S oxidoreductase4e-35148
NC_017192:88940:110333110333111082750Arcobacter sp. L, complete genomeFe-S oxidoreductase1e-34146
NC_011000:2732330:275181927518192752550732Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative iron-sulphur oxidoreductase4e-34145
NC_013501:777947:801597801597802331735Rhodothermus marinus DSM 4252, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein9e-34144
NC_014643:535708:551183551183551974792Rothia dentocariosa ATCC 17931 chromosome, complete genomecysteine-rich domain-containing protein8e-34144
NC_013355:1332263:134011513401151340858744Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein2e-33142
NC_015566:1206500:122694512269451227664720Serratia sp. AS12 chromosome, complete genomehypothetical protein5e-33141
NC_015567:1206727:122713012271301227849720Serratia sp. AS9 chromosome, complete genomehypothetical protein5e-33141
NC_015703:3637312:363856336385633639297735Runella slithyformis DSM 19594 chromosome, complete genomehypothetical protein6e-33141
NC_015388:1678000:167900416790041679726723Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein2e-29129
NC_013223:1188500:1213128121312812152812154Desulfohalobium retbaense DSM 5692, complete genomeprotein of unknown function DUF1621e-26120
NC_007519:3240864:3240864324086432430052142Desulfovibrio alaskensis G20 chromosome, complete genomeiron-sulfur cluster-binding protein9e-26117
NC_011830:4645453:4654178465417846554221245Desulfitobacterium hafniense DCB-2, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein3e-22105
NC_000909:67729:8661386613880821470Methanocaldococcus jannaschii DSM 2661, complete genomesuccinate dehydrogenase4e-1995.1
NC_010794:1476494:1495887149588714971551269Methylacidiphilum infernorum V4, complete genomeGlycolate dehydrogenase, iron-sulfur subunit GlcF1e-1893.6
NC_015499:1466794:1474100147410014754071308Thermodesulfobium narugense DSM 14796 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein2e-1893.2
NC_017093:5410932:5412383541238354137681386Actinoplanes missouriensis 431, complete genomehypothetical protein2e-1892.8
NC_013894:415776:4265694265694277831215Thermocrinis albus DSM 14484 chromosome, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein2e-1892.8
NC_015318:249445:2663582663582684122055Hippea maritima DSM 10411 chromosome, complete genomeLactate utilization protein B/C4e-1892
NC_012108:946314:9642699642699656001332Desulfobacterium autotrophicum HRM2, complete genomeGlcF11e-1790.1
NC_007575:601256:6151396151396164221284Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein2e-1789.7
NC_006510:2044347:2058546205854620598561311Geobacillus kaustophilus HTA426, complete genomeglycolate oxidase iron-sulfur subunit4e-1789
NC_008025:669281:6680076680076692841278Deinococcus geothermalis DSM 11300, complete genomeprotein of unknown function DUF224, cysteine-rich region8e-1684.3
NC_014121:3627588:3627588362758836287781191Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completesn-glycerol-3-phosphate dehydrogenase subunit C3e-1582.4
NC_009663:2156206:2172768217276821740691302Sulfurovum sp. NBC37-1, complete genomeanaerobic glycerol-3-phosphate dehydrogenase subunit C3e-1479.3
NC_007516:124486:1619281619281633041377Synechococcus sp. CC9605, complete genomeputative glycolate oxidase subunit (Fe-S) protein6e-1374.7
NC_018643:1309804:1320979132097913222681290Alpha proteobacterium HIMB5 chromosome, complete genomecysteine rich domain-containing protein2e-1273.2
NC_015169:1:1842618426198021377Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequencehypothetical protein4e-1272.4
NC_007503:1111457:1157710115771011589481239Carboxydothermus hydrogenoformans Z-2901, complete genomeglycolate oxidase, iron-sulfur subunit3e-1169.3
NC_014834:614890:6427896427896440961308Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein4e-1168.6
NC_015733:3736104:3786432378643237876491218Pseudomonas putida S16 chromosome, complete genomeglycolate oxidase, iron-sulfur subunit9e-1167.4
NC_018000:1852691:1872366187236618736971332Sinorhizobium fredii USDA 257 chromosome, complete genomeglycolate oxidase iron-sulfur subunit GlcF2e-1066.6
NC_012912:242709:2439562439562451581203Dickeya zeae Ech1591, complete genomeglycerol-3-phosphate dehydrogenase, anaerobic, C subunit2e-1066.2
NC_015138:322386:3394403394403406991260Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein2e-1066.2
NC_002754:2391867:2404567240456724057541188Sulfolobus solfataricus P2, complete genomeGlycerol-3-phosphate dehydrogenase chain C (anaerobic) (glpC)6e-1064.7
NC_008752:261903:2741152741152753741260Acidovorax avenae subsp. citrulli AAC00-1, complete genomeprotein of unknown function DUF224, cysteine-rich region domain protein6e-1064.7
NC_010125:763141:7643557643557656681314Gluconacetobacter diazotrophicus PAl 5, complete genomeputative glycolate oxidase iron-sulfur subunit7e-1064.7
NC_008786:3681847:3693930369393036951681239Verminephrobacter eiseniae EF01-2, complete genomeprotein of unknown function DUF224, cysteine-rich region domain protein2e-0963.2
NC_008820:2268900:2271230227123022727531524Prochlorococcus marinus str. MIT 9303, complete genomeFe-S oxidoreductase2e-0963.2
NC_004741:3041294:3100908310090831031902283Shigella flexneri 2a str. 2457T, complete genome3e-0962.8
NC_012589:2605085:2609264260926426104511188Sulfolobus islandicus L.S.2.15, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein3e-0962.4
NC_012588:2483000:2486569248656924877561188Sulfolobus islandicus M.14.25 chromosome, complete genomehypothetical protein3e-0962.4
NC_012622:2571812:2578075257807525792621188Sulfolobus islandicus Y.G.57.14 chromosome, complete genomehypothetical protein3e-0962.4
NC_012726:2461102:2466963246696324681501188Sulfolobus islandicus M.16.4 chromosome, complete genomehypothetical protein3e-0962.4
NC_012632:2564801:2570662257066225718491188Sulfolobus islandicus M.16.27 chromosome, complete genomehypothetical protein3e-0962.4
NC_017276:2391645:2397506239750623986931188Sulfolobus islandicus REY15A chromosome, complete genomesn-glycerol-3-phosphate dehydrogenase subunit, glpC3e-0962.4
NC_013769:2591065:2595244259524425964311188Sulfolobus islandicus L.D.8.5 chromosome, complete genomehypothetical protein3e-0962.4
NC_017275:2519637:2525498252549825266851188Sulfolobus islandicus HVE10/4 chromosome, complete genomehypothetical protein3e-0962.4
NC_012623:2680601:2684779268477926859661188Sulfolobus islandicus Y.N.15.51 chromosome, complete genomehypothetical protein3e-0962.4
NC_011901:2914000:2931187293118729324401254Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein4e-0962
NC_019962:960831:9880409880409893801341Natrinema pellirubrum DSM 15624, complete genomeglycerol-3-phosphate dehydrogenase, anaerobic, C subunit4e-0962
NC_004431:3513147:3538895353889535402321338Escherichia coli CFT073, complete genome7e-0961.2
NC_012560:4350465:4372562437256243737791218Azotobacter vinelandii DJ, complete genomeGlycolate oxidase iron-sulfur subunit, glcF9e-0960.8
NC_021150:4350461:4372558437255843737751218Azotobacter vinelandii CA6, complete genomeglycolate oxidase iron-sulfur subunit9e-0960.8
NC_012883:695652:7054267054267065801155Thermococcus sibiricus MM 739, complete genomehypothetical protein1e-0860.8
NC_015711:7265439:7267459726745972706263168Myxococcus fulvus HW-1 chromosome, complete genomeFAD-binding oxidoreductase1e-0860.5
NC_014758:1387470:1407718140771814089621245Calditerrivibrio nitroreducens DSM 19672 chromosome, completehypothetical protein2e-0859.7
NC_013967:1375255:1408197140819714095071311Haloferax volcanii DS2 chromosome, complete genomeglycerol-3-phosphate dehydrogenase subunit C4e-0858.9
NC_002940:919175:9417019417019429751275Haemophilus ducreyi 35000HP, complete genomeanaerobic glycerol-3-phosphate dehydrogenase, subunit C7e-0858.2
NC_015658:319296:3356423356423388363195Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequenceD-lactate dehydrogenase (cytochrome)2e-0756.6
NC_014761:1405408:1428266142826614295461281Oceanithermus profundus DSM 14977 chromosome, complete genomehypothetical protein3e-0755.8
NC_019792:3446895:3490376349037634934623087Natronobacterium gregoryi SP2 chromosome, complete genomeFAD/FMN-dependent dehydrogenase4e-0755.5
NC_019974:2541880:2541880254188025432411362Natronococcus occultus SP4, complete genomeglycerol 3-phosphate dehydrogenase (quinone) subunit C4e-0755.5
NC_006396:2057209:2080592208059220836573066Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceputative oxidoreductase4e-0755.5
NC_014246:1402500:1405112140511214064311320Mobiluncus curtisii ATCC 43063 chromosome, complete genomesn-glycerol-3-phosphate dehydrogenase subunit C1e-0653.5
NC_008309:555680:5556805556805569511272Haemophilus somnus 129PT, complete genomeglycerol-3-phosphate dehydrogenase, subunit C3e-0652.4
NC_012560:4350465:4350465435046543532812817Azotobacter vinelandii DJ, complete genomeFe-S/FAD domain protein4e-0652.4
NC_021150:4350461:4350461435046143532772817Azotobacter vinelandii CA6, complete genomeFe-S/FAD domain protein4e-0652.4
NC_013922:938091:9550969550969565321437Natrialba magadii ATCC 43099 chromosome, complete genomeglycerol-3-phosphate dehydrogenase, anaerobic, C subunit5e-0652
NC_012660:5793200:5794964579496457977742811Pseudomonas fluorescens SBW25 chromosome, complete genomeputative FAD-binding oxidoreductase7e-0651.2