Pre_GI: BLASTP Hits

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Query: NC_007492:857428:883215 Pseudomonas fluorescens PfO-1, complete genome

Start: 883215, End: 884669, Length: 1455

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:926479:9427539427539442071455Pseudomonas fluorescens Pf-5, complete genomeiron-sulfur cluster binding protein0916
NC_009434:3611738:3612556361255636140161461Pseudomonas stutzeri A1501, complete genomeiron-sulphur protein0840
NC_014752:1363562:1365036136503613664901455Neisseria lactamica ST-640, complete genomeiron-sulphur protein8e-153540
NC_008767:1363288:1366452136645213679061455Neisseria meningitidis FAM18, complete genomeconserved hypothetical iron-sulphur protein1e-152540
NC_014622:2477019:2489967248996724914871521Paenibacillus polymyxa SC2 chromosome, complete genomeiron-sulfur cluster binding protein4e-99362
NC_017167:674511:6944636944636958811419Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1iron-sulfur cluster binding protein4e-95348
NC_013235:4091185:4091931409193140934151485Nakamurella multipartita DSM 44233, complete genomeiron-sulfur cluster binding protein4e-95348
NC_000913:303719:3215623215623229891428Escherichia coli K12, complete genomepredicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain1e-94347
NC_010473:279948:2971122971122985391428Escherichia coli str. K-12 substr. DH10B, complete genomepredicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain1e-94347
AC_000091:303719:3215623215623229891428Escherichia coli W3110 DNA, complete genomepredicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain1e-94347
NC_012947:3487392:3488991348899134904181428Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeiron-sulfur cluster binding protein1e-94347
NC_004431:364000:4068324068324082591428Escherichia coli CFT073, complete genomePutative electron transport protein ykgF1e-94347
NC_011415:351810:3564203564203578471428Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-94347
NC_013205:747502:7631167631167645341419Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,iron-sulfur cluster binding protein2e-94346
NC_009800:349592:3729353729353743621428Escherichia coli HS, complete genomeiron-sulfur cluster binding protein3e-94345
NC_013235:3913000:3913644391364439151491506Nakamurella multipartita DSM 44233, complete genomeiron-sulfur cluster binding protein5e-94345
NC_008253:334467:3990003990004004271428Escherichia coli 536, complete genomeputative electron transport protein YkgF6e-94345
NC_014643:535708:5495465495465511711626Rothia dentocariosa ATCC 17931 chromosome, complete genomeiron-sulfur cluster-binding protein8e-94344
NC_015277:6213304:1425614256156441389Sphingobacterium sp. 21 chromosome, complete genomeLactate utilization protein B/C1e-93343
NC_007946:289425:3423053423053437321428Escherichia coli UTI89, complete genomeputative electron transport protein YkgF2e-93343
NC_013508:343617:3717243717243731451422Edwardsiella tarda EIB202, complete genomeputative electron transport protein YkgF2e-91336
NC_015566:1206500:1227675122767512290961422Serratia sp. AS12 chromosome, complete genomeiron-sulfur cluster binding protein8e-91334
NC_015567:1206727:1227860122786012292811422Serratia sp. AS9 chromosome, complete genomeiron-sulfur cluster binding protein8e-91334
NC_015957:3342169:3342954334295433444561503Streptomyces violaceusniger Tu 4113 chromosome, complete genomeiron-sulfur cluster binding protein5e-90332
NC_008563:318993:3440223440223453231302Escherichia coli APEC O1, complete genomehypothetical protein2e-89330
NC_015859:370500:3729903729903744801491Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein6e-89328
NC_004193:375416:3957243957243971601437Oceanobacillus iheyensis HTE831, complete genomeiron-sulfur protein4e-87322
NC_013501:777947:8023318023318037311401Rhodothermus marinus DSM 4252, complete genomeprotein of unknown function DUF1621e-86321
NC_013355:1332263:1340858134085813423001443Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeprotein of unknown function DUF1622e-86319
NC_015683:947048:9594249594249609681545Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein2e-83310
NC_017317:944218:9565939565939581371545Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein2e-83310
NC_014329:844622:8773368773368788801545Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein8e-83308
NC_016932:832748:8654488654488669921545Corynebacterium pseudotuberculosis 316 chromosome, complete genomeLactate utilization protein B8e-83308
NC_017031:863093:8771778771778787211545Corynebacterium pseudotuberculosis P54B96 chromosome, completeLactate utilization protein B8e-83308
NC_017300:863898:8772328772328787761545Corynebacterium pseudotuberculosis 1002 chromosome, completeLactate utilization protein B8e-83308
NC_017301:863500:8769548769548784981545Corynebacterium pseudotuberculosis C231 chromosome, completeLactate utilization protein B8e-83308
NC_017303:863060:8771478771478786911545Corynebacterium pseudotuberculosis I19 chromosome, complete genomeLactate utilization protein B8e-83308
NC_017305:863072:8771598771598787031545Corynebacterium pseudotuberculosis PAT10 chromosome, completeLactate utilization protein B8e-83308
NC_016781:844613:8773278773278788441518Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeLactate utilization protein B8e-83308
NC_011000:2732330:2750449275044927518221374Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative iron-sulphur cluster binding electron transport protein1e-82307
NC_017192:88940:1089571089571103361380Arcobacter sp. L, complete genomeputative iron-sulfur cluster binding protein2e-81303
NC_015703:3637312:3639438363943836408021365Runella slithyformis DSM 19594 chromosome, complete genomeLactate utilization protein B/C2e-81303
NC_013223:1188500:1213128121312812152812154Desulfohalobium retbaense DSM 5692, complete genomeprotein of unknown function DUF1623e-81302
NC_015930:1397524:1409610140961014110821473Lactococcus garvieae ATCC 49156, complete genomeiron-sulfur cluster binding protein2e-80300
NC_018720:417500:4327964327964343011506Bifidobacterium asteroides PRL2011 chromosome, complete genomeiron-sulfur cluster binding protein4e-79295
NC_015388:2434922:2460496246049624618631368Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeLactate utilization protein B/C7e-72271
NC_007519:3240864:3240864324086432430052142Desulfovibrio alaskensis G20 chromosome, complete genomeiron-sulfur cluster-binding protein2e-71270
NC_008818:956231:9562319562319574481218Hyperthermus butylicus DSM 5456, complete genomeuniversally conserved protein3e-59229
NC_019942:987134:1025644102564410269271284Aciduliprofundum sp. MAR08-339, complete genomehypothetical protein2e-57223
NC_013926:920279:9488649488649501441281Aciduliprofundum boonei T469 chromosome, complete genomeprotein of unknown function DUF1624e-57223
NC_008701:1226797:1226797122679712279571161Pyrobaculum islandicum DSM 4184, complete genomeprotein of unknown function DUF1629e-57221
NC_003364:756813:7616947616947628331140Pyrobaculum aerophilum str. IM2, complete genomehypothetical protein2e-53210
NC_016885:1614427:1625228162522816263971170Pyrobaculum oguniense TE7 chromosome, complete genomehypothetical protein5e-51202
NC_009376:420000:4302264302264313741149Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomehypothetical protein4e-50199
NC_015318:249445:2663582663582684122055Hippea maritima DSM 10411 chromosome, complete genomeLactate utilization protein B/C1e-46188
NC_017167:674511:693799693799694470672Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein4e-0963.2
NC_021150:4350461:434979343497934350464672Azotobacter vinelandii CA6, complete genomehypothetical protein3e-0653.9
NC_012560:4350465:434979743497974350468672Azotobacter vinelandii DJ, complete genomehypothetical protein3e-0653.9