Pre_GI: BLASTP Hits

Some Help

Query: NC_007492:857428:882544 Pseudomonas fluorescens PfO-1, complete genome

Start: 882544, End: 883215, Length: 672

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:926479:942082942082942753672Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-102371
NC_009434:3611738:361401336140133614684672Pseudomonas stutzeri A1501, complete genomehypothetical protein4e-94343
NC_021150:4350461:434979343497934350464672Azotobacter vinelandii CA6, complete genomehypothetical protein1e-89328
NC_012560:4350465:434979743497974350468672Azotobacter vinelandii DJ, complete genomehypothetical protein1e-89328
NC_018691:2863659:286282328628232863662840Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein1e-53209
NC_014752:1363562:136433813643381365039702Neisseria lactamica ST-640, complete genomehypothetical protein6e-34144
NC_008767:1363288:136575413657541366455702Neisseria meningitidis FAM18, complete genomehypothetical protein5e-34144
NC_013223:1188500:121526812152681215912645Desulfohalobium retbaense DSM 5692, complete genomeprotein of unknown function DUF1621e-1376.6
NC_019942:987134:1025644102564410269271284Aciduliprofundum sp. MAR08-339, complete genomehypothetical protein4e-1064.7
NC_013926:920279:9488649488649501441281Aciduliprofundum boonei T469 chromosome, complete genomeprotein of unknown function DUF1626e-1064.3
NC_000913:303719:322982322982323677696Escherichia coli K12, complete genomepredicted transporter2e-0858.9
NC_010473:279948:298532298532299227696Escherichia coli str. K-12 substr. DH10B, complete genomepredicted transporter2e-0858.9
AC_000091:303719:322982322982323677696Escherichia coli W3110 DNA, complete genomepredicted transporter2e-0858.9
NC_012947:3487392:348830334883033488998696Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-0858.9
NC_017167:674511:693799693799694470672Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein4e-0858.2
NC_008818:956231:9562319562319574481218Hyperthermus butylicus DSM 5456, complete genomeuniversally conserved protein3e-0755.5
NC_014622:2477019:249148024914802492235756Paenibacillus polymyxa SC2 chromosome, complete genomehypothetical protein5e-0754.7
NC_013508:343617:371029371029371724696Edwardsiella tarda EIB202, complete genomeputative transporter8e-0753.9
NC_015566:1206500:122909612290961229791696Serratia sp. AS12 chromosome, complete genomeLactate utilization protein B/C1e-0653.5
NC_015567:1206727:122928112292811229976696Serratia sp. AS9 chromosome, complete genomeLactate utilization protein B/C1e-0653.5