Pre_GI: BLASTP Hits

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Query: NC_007492:857428:874247 Pseudomonas fluorescens PfO-1, complete genome

Start: 874247, End: 875647, Length: 1401

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:1885613:1903161190316119044531293Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-134478
NC_009434:1580205:1593692159369215953201629Pseudomonas stutzeri A1501, complete genomehypothetical protein1e-77291
NC_008740:443274:4542504542504557551506Marinobacter aquaeolei VT8, complete genomehypothetical protein3e-49196
NC_007802:224470:2272782272782288011524Jannaschia sp. CCS1, complete genomehypothetical protein6e-48192
NC_020911:1859210:1867785186778518692451461Octadecabacter antarcticus 307, complete genomehypothetical protein1e-42174
NC_009952:2661268:2668891266889126702341344Dinoroseobacter shibae DFL 12, complete genomehypothetical protein1e-29131
NC_012912:1053618:1070772107077210721841413Dickeya zeae Ech1591, complete genomeCP4-57 prophage; hypothetical protein1e-25118
AC_000091:2747520:2757641275764127590501410Escherichia coli W3110 DNA, complete genomehypothetical protein1e-25118
NC_010473:2839902:2848772284877228501811410Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted protein1e-25118
NC_000913:2746886:2757007275700727584161410Escherichia coli K12, complete genomeCP4-57 prophage; predicted protein1e-25118
NC_012759:2633949:2642819264281926442281410Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage protein1e-25118
NC_015761:299386:3070563070563085491494Salmonella bongori NCTC 12419, complete genomeprophage membrane protein1e-25118
NC_008322:2077628:2086695208669520881611467Shewanella sp. MR-7, complete genomehypothetical protein5e-25115
NC_008321:1993541:2003786200378620052851500Shewanella sp. MR-4, complete genomehypothetical protein8e-22105
NC_012691:2476223:2498852249885225002971446Tolumonas auensis DSM 9187, complete genomeCP4-57 prophage; hypothetical protein6e-22105
NC_011000:2831183:2854505285450528559741470Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein6e-22105
NC_012791:721813:7399787399787414951518Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein7e-21102
NC_008577:2115440:2122846212284621243151470Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein9e-21101
NC_011751:3453683:3510875351087535123831509Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-20101
NC_004431:3409389:3487786348778634892941509Escherichia coli CFT073, complete genomeHypothetical protein yfjI1e-20101
NC_005085:1269787:1311545131154513129541410Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein5e-2099.4
NC_015740:2407500:2419559241955924210581500Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-1997.1
NC_020064:3609844:3627627362762736291891563Serratia marcescens FGI94, complete genomehypothetical protein1e-1791.7
NC_020181:5130513:5138731513873151401881458Enterobacter aerogenes EA1509E, complete genomehypothetical protein2e-1790.5
NC_011000:1216430:1226078122607812275351458Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein5e-1789.4
NC_009138:1843998:1876590187659018780411452Herminiimonas arsenicoxydans, complete genomeCP4-57 prophage; conserved hypothetical protein6e-1789
NC_014153:3084356:3103690310369031051801491Thiomonas intermedia K12 chromosome, complete genomehypothetical protein9e-1788.6
NC_011083:4547825:4575661457566145772651605Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1687.4
NC_009832:1946401:1954913195491319563461434Serratia proteamaculans 568, complete genomehypothetical protein4e-1686.7
NC_008253:3941938:3970733397073339724151683Escherichia coli 536, complete genomehypothetical protein5e-1686.3
NC_013353:3853082:3884833388483338862661434Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-1585.1
AP010958:3853082:3884833388483338862661434Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-1585.1
NC_011899:355638:3610733610733635202448Halothermothrix orenii H 168, complete genomehypothetical protein1e-1585.1
NC_012691:1250385:1271066127106612725021437Tolumonas auensis DSM 9187, complete genomeCP4-57 prophage; hypothetical protein2e-1584.3
NC_013361:1284579:1296428129642812978611434Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-1584
NC_013364:1257801:1269648126964812710811434Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-1584
NC_007946:1073135:1086378108637810878291452Escherichia coli UTI89, complete genomehypothetical protein YfjI2e-1584
NC_004431:1119700:1132944113294411344041461Escherichia coli CFT073, complete genomeHypothetical protein yfjI3e-1583.6
NC_010634:1342393:1348313134831313497491437Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-1481.6
NC_009138:668000:6838256838256851471323Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein, putative prophage protein similar to protein of phage CP4-57 of E. coli (YfjI)3e-1480.1
NC_009659:1050532:1107984110798411094351452Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein3e-1480.1
NC_014624:3810163:3824838382483838267061869Eubacterium limosum KIST612 chromosome, complete genomePrimase 12e-1377.4
NC_015381:1558263:1566319156631915679381620Burkholderia gladioli BSR3 chromosome 1, complete sequenceCP4-57 prophage; hypothetical protein2e-1377.4
NC_002655:1053082:1064034106403410654371404Escherichia coli O157:H7 EDL933, complete genomehypothetical protein4e-1376.6
NC_002655:1448605:1459641145964114610441404Escherichia coli O157:H7 EDL933, complete genomehypothetical protein4e-1376.6
NC_013008:1307392:1318446131844613198311386Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-1376.3
NC_011353:1307106:1318160131816013195451386Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein5e-1376.3
NC_002695:1364833:1375887137588713772721386Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-1376.3
NC_018678:2382708:2390336239033623918411506Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein1e-1274.7
NC_015957:8777644:8785823878582387881682346Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein5e-1169.3
NC_014624:1549312:1553407155340715552091803Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-1067
NC_014815:3272791:3291958329195832935561599Micromonospora sp. L5 chromosome, complete genomehypothetical protein8e-1065.5
NC_013729:5982000:5990566599056659922001635Kribbella flavida DSM 17836, complete genomehypothetical protein4e-0963.5
NC_009138:467268:4767694767694782231455Herminiimonas arsenicoxydans, complete genomeCP4-57 prophage; conserved hypothetical protein5e-0962.8
NC_015434:5434500:5439821543982154417761956Verrucosispora maris AB-18-032 chromosome, complete genomeDnaB domain-containing protein helicase domain-containing protein1e-0861.6
NC_013947:1011899:1030147103014710320121866Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeDnaB domain-containing protein helicase domain-containing protein7e-0859.3
NC_012108:1973861:1993336199333619958582523Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein7e-0858.9
NC_013757:2046000:2051466205146620536222157Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein2e-0757.4
NC_016114:4210173:4234794423479442363351542Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein6e-0652.8