Pre_GI: BLASTP Hits

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Query: NC_007492:4563981:4566853 Pseudomonas fluorescens PfO-1, complete genome

Start: 4566853, End: 4567188, Length: 336

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:4993974:500111650011165001445330Pseudomonas fluorescens Pf-5, complete genomecompetence protein comEA1e-23108
NC_009512:4375452:437890843789084379243336Pseudomonas putida F1, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein2e-23107
NC_017986:1128879:113550411355041135854351Pseudomonas putida ND6 chromosome, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein2e-22103
NC_012660:1804610:183339718333971833747351Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein2e-21101
NC_020209:997385:102935310293531029685333Pseudomonas poae RE*1-1-14, complete genomehypothetical protein3e-21100
NC_009656:1994392:202881820288182029141324Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein9e-1785.5
NC_002516:3519000:352416135241613524490330Pseudomonas aeruginosa PAO1, complete genomehypothetical protein3e-1580.5
NC_013416:1429881:143003814300381430367330Aggregatibacter actinomycetemcomitans D11S-1, complete genomeComE operon protein 15e-1579.7
NC_014541:1231021:123408112340811234365285Ferrimonas balearica DSM 9799 chromosome, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein3e-1373.9
NC_020134:845164:846338846338846811474Clostridium stercorarium subsp. stercorarium DSM 8532, completecompetence protein ComEA helix-hairpin-helix repeat region8e-1268.9
NC_009092:2902171:292841329284132928712300Shewanella loihica PV-4, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein9e-1165.5
NC_009828:1530732:154122115412211541763543Thermotoga lettingae TMO, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein3e-1063.9
NC_012785:20454:420894208942883795Kosmotoga olearia TBF 19.5.1, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein1e-0962
NC_007645:2408125:243129424312942431599306Hahella chejuensis KCTC 2396, complete genomeDNA uptake protein and related DNA-binding protein2e-0961.2
NC_015497:1287877:133541513354151335723309Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein9e-0958.9
NC_007575:319119:338582338582338833252Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein1e-0858.5
NC_008322:2983951:300494630049463005311366Shewanella sp. MR-7, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein2e-0857.8
NC_006361:1547034:1547034154703415486321599Nocardia farcinica IFM 10152, complete genomeputative DNA-binding protein4e-0857
NC_008767:1888950:190706619070661907530465Neisseria meningitidis FAM18, complete genomeputative DNA transport competence protein4e-0856.6
NC_014752:324832:335935335935336234300Neisseria lactamica ST-640, complete genomeDNA transport competence protein8e-0855.8
NC_015672:2236000:224043822404382240698261Flexistipes sinusarabici DSM 4947 chromosome, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein3e-0753.9
NC_013739:3006719:302441630244163025108693Conexibacter woesei DSM 14684, complete genomecompetence protein ComEA helix-hairpin-helix repeat protein7e-0752.4
NC_007614:2517226:252214225221422522444303Nitrosospira multiformis ATCC 25196 chromosome 1, completeCompetence protein ComEA helix-hairpin-helix region9e-0752.4
NC_015873:1557999:157857115785711579095525Megasphaera elsdenii DSM 20460, complete genomeComEA protein2e-0651.6
NC_004757:1021355:102587410258741026236363Nitrosomonas europaea ATCC 19718, complete genomeputative DNA transport competence protein, ComEA2e-0651.6
NC_013173:3679326:368153736815373681842306Desulfomicrobium baculatum DSM 4028, complete genome4e-0650.4