Pre_GI: BLASTP Hits

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Query: NC_007492:2310793:2330996 Pseudomonas fluorescens PfO-1, complete genome

Start: 2330996, End: 2331511, Length: 516

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008570:1986466:199051519905151991033519Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehemolysin co-regulated protein2e-55214
NC_009349:78000:780487804810171623669Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete3e-38157
NC_014166:1751906:175350717535071754031525Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeHcp1 family type VI secretion system effector4e-52203
NC_012721:1395417:141887514188751419360486Burkholderia glumae BGR1 chromosome 2, complete genomeHemolysin-coregulated protein6e-26116
NC_010627:127968:140978140978141478501Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencetype VI secretion system effector, Hcp1 family3e-1374.7
NC_014118:1171411:119129111912911191776486Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype VI secretion system effector, Hcp1 family3e-25114
NC_016590:1183470:120668812066881207173486Burkholderia sp. YI23 chromosome 3, complete sequencehypothetical protein9e-25112
NC_009802:114749:147250147250147771522Campylobacter concisus 13826, complete genomesecreted protein Hcp6e-50196
NC_009792:4017510:403007840300784030329252Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-1993.6
NC_014500:894136:914093914093914611519Dickeya dadantii 3937 chromosome, complete genomeHcp3e-58224
NC_014500:1862000:190553719055371905716180Dickeya dadantii 3937 chromosome, complete genomehcp7e-0650.1
NC_014500:3097362:313812731381273138645519Dickeya dadantii 3937 chromosome, complete genomeHcp2e-58224
NC_012912:647369:656620656620657168549Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family7e-1993.2
NC_012912:2901021:291846629184662918984519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family3e-58223
NC_012912:1701231:171793717179371718455519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family3e-58223
NC_012912:844339:852670852670853137468Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family5e-24110
NC_020181:969599:989229989229989720492Enterobacter aerogenes EA1509E, complete genomePutative cytoplasmic protein USSDB7A2e-23108
NC_015968:2195645:223124322312432231725483Enterobacter asburiae LF7a chromosome, complete genomeHcp1 family type VI secretion system effector9e-1476.3
NC_015968:4117835:412532441253244125842519Enterobacter asburiae LF7a chromosome, complete genomeHcp1 family type VI secretion system effector3e-56217
NC_014306:642152:650001650001650492492Erwinia billingiae Eb661, complete genomeVirulence factor for secretion apparatus3e-24110
NC_004547:1174650:119865011986501199129480Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-1993.6
NC_008253:257059:263065263065263583519Escherichia coli 536, complete genomehypothetical hemolysin co-regulated protein3e-57220
NC_008563:3119284:312300631230063123497492Escherichia coli APEC O1, complete genomeputative hemolysin-coregulated protein5e-25113
NC_008563:258725:263718263718264236519Escherichia coli APEC O1, complete genomehypothetical protein3e-57220
NC_011745:258727:263724263724264242519Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-56218
NC_011741:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomehypothetical protein5e-56216
CU928160:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomeConserved hypothetical protein Aec16 (Hcp-like)5e-56216
CP002516:3863932:387102238710223871504483Escherichia coli KO11, complete genometype VI secretion system effector, Hcp1 family4e-22103
NC_016902:3863932:387102238710223871504483Escherichia coli KO11FL chromosome, complete genometype VI secretion system effector4e-22103
NC_002655:261236:264134264134264652519Escherichia coli O157:H7 EDL933, complete genomehypothetical protein5e-56216
NC_011353:261220:264118264118264636519Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein5e-56216
NC_002695:261235:264133264133264651519Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-56216
NC_013008:261226:264124264124264642519Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-56216
NC_013941:261094:264076264076264594519Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHcp5e-56216
NC_011742:258746:263739263739264257519Escherichia coli S88 chromosome, complete genomehypothetical protein3e-57220
NC_011751:256830:261820261820262338519Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-57220
NC_007946:258747:263740263740264258519Escherichia coli UTI89, complete genomehypothetical protein3e-57220
CP002185:234719:240399240399240881483Escherichia coli W, complete genomeHcp-related protein4e-22103
NC_011740:1991941:200847520084752008954480Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein (Hcp-like), similar to Aec321e-1892
NC_007517:306508:312033312033312518486Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF7965e-38156
NC_014532:3596097:360886636088663609384519Halomonas elongata DSM 2581, complete genomeK068877e-56216
NC_016612:5600177:561645556164555616946492Klebsiella oxytoca KCTC 1686 chromosome, complete genometype VI secretion system effector7e-23106
NC_011283:4966471:497703349770334977512480Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion system effector2e-1581.6
NC_012731:2302974:230468523046852305176492Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-23108
NC_009648:1487692:148940314894031489894492Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-23108
NC_013850:4829455:483727848372784837769492Klebsiella variicola At-22 chromosome, complete genometype VI secretion system effector, Hcp1 family1e-1479.3
NC_015559:2745570:275060527506052751123519Marinomonas posidonica IVIA-Po-181 chromosome, complete genometype VI secretion system effector, Hcp1 family4e-52203
NC_010505:1205747:121487812148781215393516Methylobacterium radiotolerans JCM 2831, complete genometype VI secretion system effector, Hcp1 family6e-54209
NC_013956:4579759:459389845938984594425528Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein4e-21100
NC_012917:1840172:187440618744061874891486Pectobacterium carotovorum subsp. carotovorum PC1, complete genometype VI secretion system effector, Hcp1 family5e-28123
NC_013421:4006085:401413340141334014612480Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family4e-25114
NC_013421:553193:570784570784571158375Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family4e-29127
NC_013421:2453078:246131024613102461789480Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family2e-2098.6
NC_013421:57961:652456524565763519Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family6e-57219
NC_012962:1041518:106320410632041063683480Photorhabdus asymbiotica, complete genomehypothetical protein2e-24111
NC_012962:3568046:358995535899553590446492Photorhabdus asymbiotica, complete genomehypothetical protein5e-24110
NC_012962:3568046:359502135950213595512492Photorhabdus asymbiotica, complete genomehypothetical protein1e-24112
NC_012962:1041518:106109010610901061569480Photorhabdus asymbiotica, complete genomehypothetical protein2e-2098.6
NC_012962:1827000:184728718472871847766480Photorhabdus asymbiotica, complete genomesimilar to hcp protein2e-23108
NC_012962:869295:891705891705892184480Photorhabdus asymbiotica, complete genomehypothetical protein2e-21102
NC_005126:4919689:492595549259554926446492Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein9e-22102
NC_008463:282565:288454288454288972519Pseudomonas aeruginosa UCBPP-PA14, complete genomeSecreted protein Hcp1e-85315
NC_020829:1307736:132614213261421326660519Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein8e-75278
NC_008027:4889662:491355949135594914077519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1C2e-86317
NC_008027:3844355:387980238798023880302501Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 2A2e-83307
NC_008027:5576458:559406755940675594585519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A3e-87320
NC_008027:896000:896182896182896700519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A2e-86317
NC_008027:2051821:206156020615602062045486Pseudomonas entomophila L48, complete genomehypothetical protein5e-24110
NC_008027:558507:558507558507559025519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1B2e-86317
NC_009439:4913767:491983749198374920355519Pseudomonas mendocina ymp, complete genomehypothetical protein4e-74276
NC_002947:4604582:461052046105204611035516Pseudomonas putida KT2440, complete genomehcp protein4e-57220
NC_010501:3575726:359724435972443597747504Pseudomonas putida W619, complete genometype VI secretion system effector, Hcp1 family1e-24112
NC_004578:2797493:280387428038742804389516Pseudomonas syringae pv. tomato str. DC3000, complete genomesecreted protein Hcp2e-44177
NC_016642:1234500:124842712484271248942516Pseudovibrio sp. FO-BEG1 chromosome, complete genometype VI secretion system effector2e-55214
NC_016835:128757:136918136918137409492Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,type VI secretion system effector4e-21100
NC_017060:125480:127189127189127680492Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion system effector4e-24110
NC_015061:2770856:278352327835232784008486Rahnella sp. Y9602 chromosome, complete genometype VI secretion system effector, Hcp1 family6e-1270.1
NC_015062:130359:130359130359130850492Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencetype VI secretion system effector, Hcp1 family4e-24110
NC_007348:2011957:201195720119572012442486Ralstonia eutropha JMP134 chromosome 2, complete sequenceProtein of unknown function DUF7968e-27119
NC_014310:785220:807927807927808430504Ralstonia solanacearum PSI07 megaplasmid, complete sequencesecretion system protein (evpc-like), hemolysin-coregulated protein1e-0755.8
NC_010067:892729:919954919954920442489Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1685.9
NC_010067:2529750:255257725525772553068492Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-22104
NC_010067:51000:608906089061372483Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-21102
NC_011149:1110642:111395011139501114468519Salmonella enterica subsp. enterica serovar Agona str. SL483,hcp2e-56218
NC_011149:1077589:109348810934881093967480Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion system effector, Hcp1 family2e-1788.2
NC_011149:3187022:319388631938863194086201Salmonella enterica subsp. enterica serovar Agona str. SL483,hcp2e-0858.2
NC_011205:1186097:120617012061701206649480Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853HNH endonuclease domain-containing protein2e-1994.7
NC_011294:1085447:110554011055401106019480Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-1994.7
NC_011274:1094379:111445111144511114930480Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-1994.7
NC_011274:1129686:113485311348531135371519Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-56218
NC_016831:1905289:191014319101431910622480Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1994.7
NC_011147:3075186:308210930821093082249141Salmonella enterica subsp. enterica serovar Paratyphi A str2e-0858.5
NC_003198:3126548:313346031334603133600141Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-0753.5
NC_009832:1946401:196478119647811965272492Serratia proteamaculans 568, complete genomeprotein of unknown function DUF7962e-21101
NC_016822:267758:273014273014273532519Shigella sonnei 53G, complete genomehemolysin co-regulated protein4e-55213
NC_016822:246715:252419252419252901483Shigella sonnei 53G, complete genometype VI secretion system effector4e-22103
NC_007712:254000:263569263569264048480Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein9e-2096.3
NC_016944:1504888:150666015066601507178519Vibrio cholerae IEC224 chromosome I, complete sequencehcp protein6e-56216
NC_012578:1465302:146707414670741467592519Vibrio cholerae M66-2 chromosome I, complete sequencehcp protein6e-56216
NC_012668:2115228:213392121339212134439519Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHcp protein6e-56216
NC_002505:1507860:150963215096321510150519Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehcp protein6e-56216
NC_016445:984856:986816986816987145330Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehcp protein6e-29126
NC_016445:984856:986628986628986849222Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehcp protein6e-1786.7
NC_009457:1068000:106810110681011068619519Vibrio cholerae O395 chromosome 2, complete sequencehcp protein4e-56216
NC_016602:2037162:205442320544232054941519Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehcp protein3e-56217
NC_017168:2626996:263872226387222639294573Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-24110
NC_017168:2535732:254647525464752546954480Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-27121
NC_017168:3286:247372473725228492Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-23107
NC_017168:3535786:354266635426663543010345Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-1271.2
NC_017168:3977767:399630639963063996797492Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-23107
NC_010159:409500:420721420721421200480Yersinia pestis Angola, complete genomehypothetical protein2e-27121
NC_010159:172469:181740181740182231492Yersinia pestis Angola, complete genomehypothetical protein2e-22105
NC_010159:3120642:314184631418463142337492Yersinia pestis Angola, complete genomehypothetical protein2e-22105
NC_008150:317903:337604337604338095492Yersinia pestis Antiqua, complete genomehypothetical protein3e-23107
NC_008150:1384102:140108214010821401426345Yersinia pestis Antiqua, complete genomehypothetical protein3e-1271.2
NC_008150:2574794:258555725855572586036480Yersinia pestis Antiqua, complete genomehypothetical protein2e-27121
NC_008150:2822689:282940228294022829974573Yersinia pestis Antiqua, complete genomehypothetical protein4e-24110
NC_008150:844727:876138876138876629492Yersinia pestis Antiqua, complete genomehypothetical protein3e-23107
NC_017265:2306500:231860923186092318953345Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-1271.2
NC_017265:2586729:260526826052682605759492Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-23107
NC_017265:809943:828705828705829196492Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-23107
NC_017265:2940539:295248629524862952965480Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-27121
NC_005810:1467772:149117914911791491670492Yersinia pestis biovar Microtus str. 91001, complete genomehemolysin-coregulated protein (uncharacterized)3e-23107
NC_005810:1663672:167089016708901671234345Yersinia pestis biovar Microtus str. 91001, complete genomehemolysin-coregulated protein (uncharacterized)3e-1271.2
NC_005810:1230976:123636512363651236937573Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-24110
NC_005810:3021913:303299430329943033473480Yersinia pestis biovar Microtus str. 91001, complete genomehemolysin-coregulated protein (uncharacterized)2e-27121
NC_005810:3917254:393870739387073939198492Yersinia pestis biovar Microtus str. 91001, complete genomehemolysin-coregulated protein (uncharacterized)3e-23107
NC_003143:2101902:211800321180032118347345Yersinia pestis CO92, complete genomehypothetical protein3e-1271.2
NC_003143:3191246:320198932019893202468480Yersinia pestis CO92, complete genomehypothetical protein2e-27121
NC_003143:3115933:312313031231303123702573Yersinia pestis CO92, complete genomehypothetical protein4e-24110
NC_003143:1630000:166227416622741662765492Yersinia pestis CO92, complete genomehypothetical protein3e-23107
NC_003143:1059580:108004610800461080537492Yersinia pestis CO92, complete genomehypothetical protein3e-23107
NC_017154:2876545:288723328872332887712480Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-27121
NC_017154:902739:922440922440922931492Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-23107
NC_017154:2100587:211757221175722117916345Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-1271.2
NC_017154:3188795:320052132005213201093573Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-24110
NC_017154:1644404:167385716738571674348492Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-23107
NC_017160:3094768:310368631036863104165480Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-27121
NC_017160:1628500:165435116543511654842492Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-23107
NC_004088:1265730:127745612774561278028573Yersinia pestis KIM, complete genomehypothetical protein4e-24110
NC_004088:3689000:370815337081533708644492Yersinia pestis KIM, complete genomehypothetical protein3e-23107
NC_004088:2966331:298486729848672985358492Yersinia pestis KIM, complete genomehypothetical protein3e-23107
NC_004088:1510467:151755915175591518038480Yersinia pestis KIM, complete genomehypothetical protein2e-27121
NC_008149:1440371:144747914474791447958480Yersinia pestis Nepal516, complete genomehypothetical protein2e-27121
NC_008149:1195614:120734012073401207912573Yersinia pestis Nepal516, complete genomemembrane protein4e-24110
NC_008149:3556999:357602935760293576520492Yersinia pestis Nepal516, complete genomehypothetical protein3e-23107
NC_008149:2517538:253359025335902533934345Yersinia pestis Nepal516, complete genomehypothetical protein3e-1271.2
NC_008149:2802392:282093128209312821422492Yersinia pestis Nepal516, complete genomehypothetical protein3e-23107
NC_009381:1414985:141784714178471418191345Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-1271.2
NC_009381:1682000:170220017022001702691492Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-23107
NC_009381:588137:606893606893607384492Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-23107
NC_014029:2388500:239168123916812392025345Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-1271.2
NC_014029:1702338:173178417317841732275492Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-23107
NC_014029:3245778:325750432575043258076573Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-24110
NC_014029:961522:980295980295980786492Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-23107
NC_014029:3171627:317871931787193179198480Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-27121
NC_009708:874770:893523893523894014492Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-23107
NC_009708:915814:938848938848939339492Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-23107
NC_009708:1403434:140995514099551410434480Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-27121
NC_009708:2788855:283854128385412839032492Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-23107
NC_006155:3333303:334425333442533344732480Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-27121
NC_006155:3805640:382613538261353826626492Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-23107
NC_006155:1756000:178167217816721782163492Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-23107
NC_006155:2208686:222234422223442222688345Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-1168.2
NC_010634:2124185:213866821386682139012345Yersinia pseudotuberculosis PB1/+, complete genomeHcp1 family type VI secretion system effector2e-1168.2
NC_010634:3250810:326173732617373262216480Yersinia pseudotuberculosis PB1/+, complete genomeHcp1 family type VI secretion system effector2e-27121
NC_010634:3720214:373921637392163739707492Yersinia pseudotuberculosis PB1/+, complete genomeHcp1 family type VI secretion system effector3e-23107
NC_010634:1755548:178190317819031782394492Yersinia pseudotuberculosis PB1/+, complete genomeHcp1 family type VI secretion system effector3e-23107
NC_010465:893921:912664912664913155492Yersinia pseudotuberculosis YPIII, complete genometype VI secretion system effector, Hcp1 family3e-23107
NC_010465:1427170:143539214353921435871480Yersinia pseudotuberculosis YPIII, complete genometype VI secretion system effector, Hcp1 family2e-27121