Pre_GI: BLASTP Hits

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Query: NC_007492:2310793:2318814 Pseudomonas fluorescens PfO-1, complete genome

Start: 2318814, End: 2319686, Length: 873

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009925:4271140:428774742877474288613867Acaryochloris marina MBIC11017, complete genomevancomycin B-type resistance protein VanW, putative2e-52206
NC_014639:1358597:137340013734001374308909Bacillus atrophaeus 1942 chromosome, complete genomefactor for cell wall maintenance or synthesis2e-0963.2
CP002207:1358597:137340013734001374308909Bacillus atrophaeus 1942, complete genomeputative factor for cell wall maintenance or synthesis2e-0963.2
UCMB5137:1396603:140373814037381404646909Bacillus atrophaeus UCMB-5137putative factor for cell wall maintenance or synthesis2e-0963.2
NC_011773:3371989:337390733739073374818912Bacillus cereus AH820 chromosome, complete genomeputative lipoprotein3e-1582.4
NC_021171:4367834:438281243828124383717906Bacillus sp. 1NLA3E, complete genomeprotein YoaR6e-1375.1
NC_017195:2027430:202743020274302028341912Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completesporulation VanW like protein YoaR1e-0963.9
NC_014652:1651671:1670788167078816721641377Caldicellulosiruptor hydrothermalis 108 chromosome, completevanw family protein1e-0963.9
NC_015671:2011462:202696120269612027782822Cellvibrio gilvus ATCC 13127 chromosome, complete genomeVanW family protein8e-39160
NC_014393:187454:1913251913251926951371Clostridium cellulovorans 743B chromosome, complete genomeVanW family protein2e-1272.8
NC_016627:762000:778451778451779356906Clostridium clariflavum DSM 19732 chromosome, complete genomeputative vancomycin resistance protein5e-1272
NC_016627:2023750:203996120399612040782822Clostridium clariflavum DSM 19732 chromosome, complete genomeputative vancomycin resistance protein3e-47188
NC_020291:5641444:5657348565734856588381491Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative vancomycin resistance protein5e-1375.5
NC_010545:236000:2373862373862391161731Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein3e-0755.8
NC_015161:354000:356871356871357683813Deinococcus proteolyticus MRP chromosome, complete genomeVanW family protein5e-54211
NC_018515:989616:1005875100587510072391365Desulfosporosinus meridiei DSM 13257 chromosome, complete genomevancomycin resistance protein7e-1168.2
NC_015565:2508345:250834525083452509277933Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeVanW family protein4e-0962.4
NC_015573:893862:9113439113439126831341Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeVanW family protein1e-0654.3
NC_009253:829913:8304008304008317701371Desulfotomaculum reducens MI-1 chromosome, complete genomeVanW family protein3e-1479.3
NC_015589:3340500:335470733547073355549843Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeVanW family protein8e-49194
NC_004668:2198027:221495622149562215783828Enterococcus faecalis V583, complete genomevancomycin B-type resistance protein VanW1e-30134
NC_012673:2152639:215822821582282159070843Exiguobacterium sp. AT1b, complete genomeVanW family protein1e-48193
NC_013757:3717500:3738787373878737410332247Geodermatophilus obscurus DSM 43160, complete genomeVanW family protein5e-0652
NC_019978:178277:179029179029179832804Halobacteroides halobius DSM 5150, complete genomeputative vancomycin resistance protein8e-1994.4
NC_019978:686362:690820690820691674855Halobacteroides halobius DSM 5150, complete genomeputative vancomycin resistance protein8e-1477.8
NC_010337:147664:176364176364177230867Heliobacterium modesticaldum Ice1, complete genomevanw domain protein, putative3e-0652.8
NC_014319:587977:606569606569607114546Leuconostoc gasicomitatum LMG 18811, complete genomevancomycin B-type resistance protein VanW2e-29129
NC_015387:155728:1545711545711557311161Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeVanW family protein2e-1272.8
NC_007644:711476:723881723881724798918Moorella thermoacetica ATCC 39073, complete genomeCopper amine oxidase-like8e-0857.8
NC_008726:1175999:1192306119230611940541749Mycobacterium vanbaalenii PYR-1, complete genomeVanW family protein7e-0858.2
NC_018870:1695588:1695588169558816970541467Thermacetogenium phaeum DSM 12270 chromosome, complete genomeVanW like protein3e-1376.3