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Query: NC_007492:2310793:2316541 Pseudomonas fluorescens PfO-1, complete genome

Start: 2316541, End: 2316942, Length: 402

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020829:1840281:186247118624711862872402Pseudomonas denitrificans ATCC 13867, complete genomeISPsy11, transposase OrfA1e-43174
NC_015424:2462522:247543124754312475829399Aeromonas veronii B565 chromosome, complete genomeIS3 family transposase A1e-41167
NC_014931:6415940:642900964290096429419411Variovorax paradoxus EPS chromosome, complete genomeISPsy11, transposase OrfA5e-36149
NC_011001:2085986:214095421409542141352399Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative transposase2e-34144
NC_011149:1987291:198947519894751989876402Salmonella enterica subsp. enterica serovar Agona str. SL483,ISPsy11, transposase OrfA2e-34144
NC_011149:4677412:467834246783424678743402Salmonella enterica subsp. enterica serovar Agona str. SL483,ISPsy11, transposase OrfA2e-34144
NC_011149:1077589:108707410870741087475402Salmonella enterica subsp. enterica serovar Agona str. SL483,ISPsy11, transposase OrfA2e-34144
NC_012125:3941974:394463339446333945034402Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein2e-34144
NC_015567:2039443:205616620561662056564399Serratia sp. AS9 chromosome, complete genomeISPsy11, transposase OrfA2e-34144
NC_015566:2039431:205615420561542056552399Serratia sp. AS12 chromosome, complete genomeISPsy11, transposase OrfA2e-34144
NC_006905:3942753:394983939498393950240402Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein3e-34143
NC_006905:3780000:378839637883963788797402Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein3e-34143
NC_014228:3391500:340598934059893406378390Xenorhabdus nematophila ATCC 19061, complete genometransposase3e-33140
NC_015224:610807:610807610807611205399Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,IS1669 hypothetical protein1e-31134
NC_013716:5141269:514867751486775149078402Citrobacter rodentium ICC168, complete genomeIS3 family transposase A3e-31133
NC_015276:2852010:285267228526722853079408Marinomonas mediterranea MMB-1 chromosome, complete genometransposase3e-23106
NC_013037:2305585:231813523181352318542408Dyadobacter fermentans DSM 18053, complete genometransposase3e-22103
NC_016599:2119631:212609521260952126520426Owenweeksia hongkongensis DSM 17368 chromosome, complete genomehypothetical protein2e-1684.3
NC_015846:924087:941293941293941922630Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein3e-1580.5