Pre_GI: BLASTP Hits

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Query: NC_007492:2310793:2311467 Pseudomonas fluorescens PfO-1, complete genome

Start: 2311467, End: 2313914, Length: 2448

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:3595882:3600131360013136025932463Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-168593
NC_009952:3522370:3523424352342435258262403Dinoroseobacter shibae DFL 12, complete genomepredicted permease FtsX1e-123444
NC_008700:3514745:3518305351830535209232619Shewanella amazonensis SB2B, complete genomeputative ABC transport system permease protein1e-1895.5
NC_008769:1125567:1133031113303111355982568Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative adhesion component transport transmembrane protein ABC transporter2e-1792
NC_012207:1097228:1104692110469211072592568Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative adhesion component transport transmembrane protein ABC transporter2e-1792
NC_016804:1095846:1103310110331011058772568Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative adhesion component transport transmembrane protein ABC transporter2e-1792
NC_009525:1096386:1103850110385011064172568Mycobacterium tuberculosis H37Ra, complete genomeadhesion component ABC transporter permease protein2e-1792
NC_009565:1098847:1106310110631011088772568Mycobacterium tuberculosis F11, complete genomehypothetical adhesion component transport transmembrane protein ABC transporter2e-1792
NC_000962:1095078:1102542110254211051092568Mycobacterium tuberculosis H37Rv, complete genomePROBABLE ADHESION COMPONENT TRANSPORT TRANSMEMBRANE PROTEIN ABC TRANSPORTER2e-1792
NC_012943:3299744:3306858330685833094252568Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein2e-1792
NC_016768:3296478:3303592330359233061592568Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeadhesion component transport transmembrane protein2e-1792
NC_002945:1095337:1102993110299311042641272Mycobacterium bovis AF2122/97, complete genomeadhesion component transport transmembrane protein ABC transporter2e-1792
NC_015848:1105892:1113349111334911159162568Mycobacterium canettii CIPT 140010059, complete genomeputative adhesion component transport transmembrane protein ABC transporter2e-1791.7
NC_002755:1095105:1102581110258111051482568Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein4e-1790.9
NC_017026:1095753:110345111034511104254804Mycobacterium tuberculosis RGTB327 chromosome, complete genomeadhesion component transport transmembrane protein5e-1377.4
NC_009348:2738742:2740116274011627424642349Aeromonas salmonicida subsp. salmonicida A449, complete genomeABC-type transporter, permease protein4e-1067.4
NC_002945:1095337:1104265110426511055601296Mycobacterium bovis AF2122/97, complete genomeadhesion component transport transmembrane protein ABC transporter1e-0966.2
NC_017026:1095753:1104283110428311057911509Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein1e-0965.9