Pre_GI: BLASTP Hits

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Query: NC_007492:2203220:2208235 Pseudomonas fluorescens PfO-1, complete genome

Start: 2208235, End: 2209443, Length: 1209

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:4167500:4201148420114842077716624Pseudomonas putida KT2440, complete genomeDNA helicase-related protein0661
NC_011761:1357799:1357799135779913643956597Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein3e-117422
NC_015137:2582467:2596997259699726036236627Burkholderia sp. CCGE1001 chromosome 2, complete sequenceDNA helicase-like protein1e-115416
NC_003902:2469500:2469862246986224765366675Xanthomonas campestris pv. campestris str. ATCC 33913, completeDNA helicase related protein1e-114413
NC_010552:752007:7597217597217663146594Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceDNA helicase related protein2e-111402
NC_007086:2477040:2502709250270925091796471Xanthomonas campestris pv. campestris str. 8004, complete genomeDNA helicase related protein4e-101368
NC_014365:2810405:2822643282264328290716429Desulfarculus baarsii DSM 2075 chromosome, complete genomeDNA helicase related protein2e-89329
NC_008751:1043269:1062386106238610682625877Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeconserved hypothetical protein, putative DNA helicase5e-81301
NC_014306:3006028:3017915301791530237915877Erwinia billingiae Eb661, complete genomeSuperfamily I DNA and RNA helicase subunit1e-70266
NC_008576:357893:3653283653283712495922Magnetococcus sp. MC-1, complete genomesuperfamily I DNA and RNA helicase and helicase subunit2e-63243
NC_013173:1305916:1321479132147913273585880Desulfomicrobium baculatum DSM 4028, complete genomeconserved hypothetical protein, putative DNA helicase2e-62239
NC_016642:471656:4748764748764816436768Pseudovibrio sp. FO-BEG1 chromosome, complete genomehypothetical protein4e-59229
NC_017904:2162045:2181591218159121880436453Mycobacterium sp. MOTT36Y chromosome, complete genomeDNA helicase1e-30134
NC_008705:868623:8736718736718800486378Mycobacterium sp. KMS, complete genomeconserved hypothetical protein, putative DNA helicase7e-29128
NC_008146:861319:8663678663678727446378Mycobacterium sp. MCS, complete genomeconserved hypothetical protein, putative DNA helicase7e-29128
NC_018581:2768743:2789405278940527953985994Gordonia sp. KTR9 chromosome, complete genomeSuperfamily I DNA and RNA helicase and helicase subunits9e-29128
NC_008596:1302000:1327732132773213339086177Mycobacterium smegmatis str. MC2 155, complete genomehypothetical protein8e-28125
NC_015125:1668780:1668780166878016752746495Microbacterium testaceum StLB037, complete genomesuperfamily I DNA and RNA helicase and helicase subunits6e-25115
NC_016943:3270308:3270308327030832762265919Blastococcus saxobsidens DD2, complete genomeputative ATP-dependent helicase3e-1789.7