Pre_GI: BLASTN Hits

Some Help

Query: NC_007482:607365 Pseudoalteromonas haloplanktis TAC125 chromosome II, complete

Start: 607365, End: 634715, Length: 27351

Host Lineage: Pseudoalteromonas haloplanktis; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a sample of coastal sea water near a French Antarctic station. This organism is adapted to growth at low temperatures and reactive oxygen species by a number of putative dioxygenases and fatty acid desaturases amongst other proteins. The organism can grow optimally in salt concentrations of 1.5 to 3.5% NaCl.The genome consists of 2 chromosomes, one of which may replicate unidirectionally. Some interesting features of this genome include the lack of the nucleoid-associated gene hns, a lack of genes involved in molybdopterin metabolism, a lack of the cAMP-CAP complex, and a lack of the PEP-dependent PTS system.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015554:2505437*2505437252927323837Alteromonas sp. SN2 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008228:20686412068641208901520375Pseudoalteromonas atlantica T6c, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_012691:2050957*2050957206859917643Tolumonas auensis DSM 9187, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_008262:11395001139500116059921100Clostridium perfringens SM101, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008261:13328641332864135143618573Clostridium perfringens ATCC 13124, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_003366:11226541122654114059917946Clostridium perfringens str. 13, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008345:27179452717945274112723183Shewanella frigidimarina NCIMB 400, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010674:21857042185704221026824565Clostridium botulinum B str. Eklund 17B, complete genome3e-0661.9BLASTN svgBLASTP svg