Pre_GI: BLASTP Hits

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Query: NC_007482:607365:632567 Pseudoalteromonas haloplanktis TAC125 chromosome II, complete

Start: 632567, End: 633442, Length: 876

Host Lineage: Pseudoalteromonas haloplanktis; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a sample of coastal sea water near a French Antarctic station. This organism is adapted to growth at low temperatures and reactive oxygen species by a number of putative dioxygenases and fatty acid desaturases amongst other proteins. The organism can grow optimally in salt concentrations of 1.5 to 3.5% NaCl.The genome consists of 2 chromosomes, one of which may replicate unidirectionally. Some interesting features of this genome include the lack of the nucleoid-associated gene hns, a lack of genes involved in molybdopterin metabolism, a lack of the cAMP-CAP complex, and a lack of the PEP-dependent PTS system.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016822:1781644:178164417816441782573930Shigella sonnei 53G, complete genomeDNA replication terminus site-binding protein3e-22105
NC_005126:2756984:277530327753032776229927Photorhabdus luminescens subsp. laumondii TTO1, complete genomeDNA replication terminus site-binding protein5e-21102
NC_017168:3192817:321471832147183215692975Yersinia pestis A1122 chromosome, complete genomeDNA replication terminus site-binding protein5e-2098.6