Pre_GI: BLASTP Hits

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Query: NC_007384:4530000:4540044 Shigella sonnei Ss046, complete genome

Start: 4540044, End: 4540496, Length: 453

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. A leading cause of dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. This extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016822:4686971:469697146969714697423453Shigella sonnei 53G, complete genomecarbon-phosphorus lyase complex subunit4e-83306
NC_011741:4395156:440515644051564405608453Escherichia coli IAI1 chromosome, complete genomecarbon-phosphorus lyase complex subunit4e-83306
NC_011415:4582388:459252645925264592978453Escherichia coli SE11 chromosome, complete genomephosphonate metabolism protein4e-83306
CU928160:4395156:440515644051564405608453Escherichia coli IAI1 chromosome, complete genomecarbon-phosphorus lyase complex subunit4e-83306
CP002185:4566150:457973545797354580187453Escherichia coli W, complete genomecarbon-phosphorus lyase complex subunit4e-83306
NC_011751:4795928:480735048073504807802453Escherichia coli UMN026 chromosome, complete genomecarbon-phosphorus lyase complex subunit2e-82304
NC_010468:4305105:431226543122654312717453Escherichia coli ATCC 8739, complete genomephosphonate C-P lyase system protein PhnG1e-82304
NC_012947:4106031:411359041135904114042453Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephosphonate C-P lyase system protein PhnG1e-82304
NC_012967:4289929:430006643000664300518453Escherichia coli B str. REL606 chromosome, complete genomecarbon-phosphorus lyase complex subunit1e-82304
NC_011748:4695932:470599847059984706450453Escherichia coli 55989, complete genomecarbon-phosphorus lyase complex subunit5e-82302
CU928145:4695932:470599847059984706450453Escherichia coli 55989 chromosome, complete genomecarbon-phosphorus lyase complex subunit5e-82302
NC_008253:4541915:455385045538504554302453Escherichia coli 536, complete genomePhnG protein1e-81301
NC_010473:4409492:441962944196294420081453Escherichia coli str. K-12 substr. DH10B, complete genomecarbon-phosphorus lyase complex subunit1e-81301
NC_000913:4307471:431926743192674319719453Escherichia coli K12, complete genomecarbon-phosphorus lyase complex subunit1e-81301
CP002516:4431235:443890244389024439354453Escherichia coli KO11, complete genomephosphonate C-P lyase system protein PhnG1e-81301
NC_002655:5194804:520608452060845206536453Escherichia coli O157:H7 EDL933, complete genomephosphonate metabolism1e-81301
NC_002695:5164819:517609951760995176551453Escherichia coli O157:H7 str. Sakai, complete genomePhnG1e-81301
AC_000091:4313167:432592243259224326374453Escherichia coli W3110 DNA, complete genomecarbon-phosphorus lyase complex subunit1e-81301
NC_011353:5240020:525129952512995251751453Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephosphonate C-P lyase system protein PhnG1e-81301
NC_012759:4247865:425800242580024258454453Escherichia coli BW2952 chromosome, complete genomecarbon-phosphorus lyase complex subunit1e-81301
NC_013008:5196080:520736052073605207812453Escherichia coli O157:H7 str. TW14359 chromosome, complete genomecarbon-phosphorus lyase complex subunit1e-81301
NC_013941:5013695:502496550249655025417453Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphonate C-P lyase system protein PhnG1e-81301
NC_016902:4431235:443890244389024439354453Escherichia coli KO11FL chromosome, complete genomephosphonate C-P lyase system protein PhnG1e-81301
NC_009800:4332229:434581443458144346266453Escherichia coli HS, complete genomephosphonate C-P lyase system protein PhnG8e-82301
NC_010498:4656716:466674146667414667193453Escherichia coli SMS-3-5, complete genomephosphonate C-P lyase system protein PhnG3e-81300
NC_011750:4719477:472958047295804730032453Escherichia coli IAI39 chromosome, complete genomecarbon-phosphorus lyase complex subunit3e-81300
AP010958:5022196:503233350323335032785453Escherichia coli O103:H2 str. 12009 DNA, complete genomecarbon-phosphorus lyase complex subunit PhnG2e-81300
NC_009801:4643000:465313046531304653582453Escherichia coli E24377A, complete genomephosphonate C-P lyase system protein PhnG2e-81300
NC_013353:5022196:503233350323335032785453Escherichia coli O103:H2 str. 12009, complete genomecarbon-phosphorus lyase complex subunit PhnG2e-81300
NC_011742:4569683:458231945823194582771453Escherichia coli S88 chromosome, complete genomecarbon-phosphorus lyase complex subunit4e-81299
NC_008563:4656000:466779146677914668243453Escherichia coli APEC O1, complete genomePhnG, carbon-phosphorus lyase complex subunit4e-81299
NC_004431:4867648:488028448802844880736453Escherichia coli CFT073, complete genomePhnG protein4e-81299
NC_013364:5040268:505385350538535054305453Escherichia coli O111:H- str. 11128, complete genomecarbon-phosphorus lyase complex subunit PhnG1e-80298
NC_007613:4156841:417043541704354170887453Shigella boydii Sb227, complete genomePhnG2e-80297
NC_014562:1935088:193673919367391937185447Pantoea vagans C9-1 chromosome, complete genomeProtein phnG2e-40164
NC_007606:3842708:385142438514243851863440Shigella dysenteriae Sd197, complete genome6e-40162
NC_016818:546805:550128550128550571444Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completephosphonate C-P lyase system protein PhnG2e-36151
NC_018645:3719302:374028337402833740729447Desulfobacula toluolica Tol2, complete genomephopsphonate metabolism protein,C-P lyase subunit PhnG1e-1995.1
NC_008786:3291700:330918233091823309673492Verminephrobacter eiseniae EF01-2, complete genomeputative phosphonate metabolism PhnG protein4e-1167