Pre_GI: BLASTP Hits

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Query: NC_007384:2933625:2933164 Shigella sonnei Ss046, complete genome

Start: 2933164, End: 2933628, Length: 465

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. A leading cause of dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. This extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012947:3015985:301598530159853016446462Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein4e-75279
NC_011415:1472500:149739714973971497861465Escherichia coli SE11 chromosome, complete genomeputative phage endopeptidase5e-75279
NC_013941:699286:716243716243716716474Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeRz endopeptidase from lambdoid prophage DLP128e-75278
NC_013361:3112023:311748531174853117946462Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendopeptidase2e-74277
NC_011742:1177946:119983111998311200292462Escherichia coli S88 chromosome, complete genomemurein endopeptidase; DLP12 prophage2e-73274
NC_012947:3231893:323564232356423236103462Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein2e-73274
NC_012967:531000:549576549576550037462Escherichia coli B str. REL606 chromosome, complete genomeputative murein endopeptidase2e-73274
NC_007946:1239278:125891012589101259383474Escherichia coli UTI89, complete genomeputative Rz endopeptidase from lambdoid prophage DLP121e-73274
NC_008563:1175035:119629711962971196770474Escherichia coli APEC O1, complete genomeputative Rz endopeptidase from lambdoid prophage1e-73274
NC_012947:2366000:237736123773612377825465Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein1e-73274
NC_011740:2769961:277523827752382775711474Escherichia fergusonii ATCC 35469, complete genomeputative murein endopeptidase; DLP12 prophage1e-68258
NC_008563:1475500:148489514848951485371477Escherichia coli APEC O1, complete genomehypothetical protein6e-67252
NC_000913:558920:577330577330577791462Escherichia coli K12, complete genomeDLP12 prophage; predicted murein endopeptidase6e-66249
NC_010473:498252:516662516662517123462Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted murein endopeptidase6e-66249
NC_010473:623810:629922629922630383462Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted murein endopeptidase6e-66249
AC_000091:558920:577330577330577791462Escherichia coli W3110 DNA, complete genomepredicted murein endopeptidase6e-66249
NC_012759:461680:480090480090480551462Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative murein endopeptidase6e-66249
CU928145:1773642:178211417821141782578465Escherichia coli 55989 chromosome, complete genomeputative murein endopeptidase; DLP12 prophage4e-63239
NC_011748:1773642:178211417821141782578465Escherichia coli 55989, complete genomeputative murein endopeptidase; DLP12 prophage4e-63239
NC_013364:3312379:333608333360833336550468Escherichia coli O111:H- str. 11128, complete genomeputative endopeptidase1e-59228
NC_011353:2957962:295885129588512959318468Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage lysis protein1e-59228
NC_013008:2910567:291361829136182914085468Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeendopeptidase of prophage CP-933U2e-57220
NC_002695:1929215:194614119461411946608468Escherichia coli O157:H7 str. Sakai, complete genomeputative endopeptidase2e-57220
CU928145:1408280:142983614298361430309474Escherichia coli 55989 chromosome, complete genomeEndopeptidase (Lysis protein Rz)1e-49194
NC_011748:1408280:142983614298361430309474Escherichia coli 55989, complete genomeEndopeptidase (Lysis protein Rz)1e-49194
NC_011294:1220526:123638912363891236868480Salmonella enterica subsp. enterica serovar Enteritidis strphage lysozyme8e-48189
NC_016831:1734292:174088017408801741359480Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage lysozyme8e-48189
NC_011205:1345511:137223813722381372738501Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage lysis protein5e-48189
NC_006905:368942:392143392143392580438Salmonella enterica subsp. enterica serovar Choleraesuis strRz lysis protein2e-46184
NC_009436:2776410:281037328103732810834462Enterobacter sp. 638, complete genomebacteriophage lysis protein5e-46182
NC_011751:643976:663770663770664249480Escherichia coli UMN026 chromosome, complete genomeEndopeptidase from phage origin9e-46182
NC_011083:374000:393885393885394322438Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bacteriophage lysis protein2e-45180
NC_017328:303987:326072326072326509438Shigella flexneri 2002017 chromosome, complete genomeRz protein4e-45179
NC_011740:2072173:210037421003742100853480Escherichia fergusonii ATCC 35469, complete genomeEndopeptidase from phage origin (Lysis protein Rz)6e-45179
CU928145:824367:838985838985839434450Escherichia coli 55989 chromosome, complete genomebacteriophage lysis protein6e-44176
NC_011748:824367:838985838985839434450Escherichia coli 55989, complete genomebacteriophage lysis protein6e-44176
NC_013364:2898964:290746329074632907900438Escherichia coli O111:H- str. 11128, complete genomeputative endopeptidase4e-44176
NC_012967:1403733:141822514182251418524300Escherichia coli B str. REL606 chromosome, complete genomeputative defective peptidase1e-43174
AC_000091:1407693:142505914250591425358300Escherichia coli W3110 DNA, complete genomepredicted defective peptidase1e-43174
NC_000913:1404000:142136914213691421668300Escherichia coli K12, complete genomeRac prophage; predicted defective peptidase1e-43174
NC_010473:1493983:151076515107651511064300Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; predicted defective peptidase1e-43174
NC_012125:1330066:135341813534181353885468Salmonella enterica subsp. enterica serovar Paratyphi C straingp151e-41168
NC_014121:3627588:365891236589123659370459Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacteriophage lysis protein2e-40164
NC_009800:289000:309952309952310389438Escherichia coli HS, complete genomebacteriophage lysis protein2e-37154
NC_010067:2529750:257967425796742580111438Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-36149
NC_014562:1772842:177839417783941778870477Pantoea vagans C9-1 chromosome, complete genomeputative endopeptidase1e-35148
NC_011147:2496808:250358625035862504053468Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-33141
NC_006511:2501500:250805025080502508499450Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-33140
NC_011205:609464:635672635672636142471Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage lysis protein2e-30131
NC_016816:1970189:199332319933231993823501Pantoea ananatis LMG 5342, complete genomeputative phage endopeptidase6e-29126
NC_011283:2836000:289710628971062897570465Klebsiella pneumoniae 342 chromosome, complete genomebacteriophage lysis protein9e-29125
NC_010067:2304313:232553223255322326428897Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-28124
NC_020063:2565605:257162125716212572103483Enterobacteriaceae bacterium strain FGI 57, complete genomeBacteriophage lysis protein3e-26117
NC_013282:1804909:182556518255651826029465Cronobacter turicensis, complete genomeEndopeptidase5e-26116
NC_017046:2756000:275602427560242756497474Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein2e-25114
NC_014228:2270000:228932722893272289815489Xenorhabdus nematophila ATCC 19061, complete genomeputative Phosphoprotein phosphatase1e-1789
NC_013892:2005480:200921120092112009678468Xenorhabdus bovienii SS-2004 chromosome, complete genomeendopeptidase (Protein gp15)6e-1682.8
NC_013892:671000:689248689248689727480Xenorhabdus bovienii SS-2004 chromosome, complete genomeRac prophage; prophage lambda endopeptidase1e-1479
NC_010554:539122:544685544685545146462Proteus mirabilis HI4320, complete genomephage endopeptidase4e-1477
NC_009783:1956000:197415019741501974632483Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-1375.1
NC_014228:3022903:304108930410893041544456Xenorhabdus nematophila ATCC 19061, complete genomeputative Phosphoprotein phosphatase1e-1272
NC_015663:4767443:477305747730574773434378Enterobacter aerogenes KCTC 2190 chromosome, complete genomelysis protein4e-1270.5
NC_016514:2476359:249623824962382496627390Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein5e-1166.6
NC_013850:1887556:191145119114511911828378Klebsiella variicola At-22 chromosome, complete genomelysis protein9e-1165.9
NC_007712:1219957:124908112490811249551471Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein5e-1063.5
NC_017047:1906000:191893719189371919470534Rahnella aquatilis HX2 chromosome, complete genomelysis protein4e-0753.9
NC_012751:899394:906110906110906499390Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completehypothetical protein6e-0649.7
NC_017060:59500:924479244792953507Rahnella aquatilis HX2 plasmid PRA1, complete sequencelysis protein8e-0649.3