Pre_GI: BLASTP Hits

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Query: NC_007384:2007467:2007467 Shigella sonnei Ss046, complete genome

Start: 2007467, End: 2007865, Length: 399

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. A leading cause of dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. This extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:1997891:200170520017052002103399Escherichia coli O111:H- str. 11128, complete genomeputative hydrolase2e-73273
NC_009801:1392696:141504714150471415445399Escherichia coli E24377A, complete genomeacyl-CoA thioester hydrolase YciA2e-73273
NC_010473:1384000:139926813992681399666399Escherichia coli str. K-12 substr. DH10B, complete genomepredicted hydrolase2e-73273
NC_007606:1209132:122095012209501221348399Shigella dysenteriae Sd197, complete genomehypothetical protein2e-73273
NC_020063:2565605:259589125958912596289399Enterobacteriaceae bacterium strain FGI 57, complete genomeacyl-CoA hydrolase2e-64243
NC_004088:2227278:224780722478072248256450Yersinia pestis KIM, complete genomehypothetical protein3e-58223
NC_010465:2282874:228546622854662285915450Yersinia pseudotuberculosis YPIII, complete genomethioesterase superfamily protein3e-58223
NC_008150:1705152:174353417435341743983450Yersinia pestis Antiqua, complete genomeputative acyl-CoA thioester hydrolase3e-58223
NC_010159:2440947:244156924415692442018450Yersinia pestis Angola, complete genomethioesterase family protein3e-58223
NC_008149:1842500:188019518801951880644450Yersinia pestis Nepal516, complete genomeacyl-CoA thioester hydrolase3e-58223
NC_009381:1064227:106484910648491065298450Yersinia pestis Pestoides F chromosome, complete genomeacyl-CoA thioester hydrolase3e-58223
NC_009708:2245586:224817822481782248627450Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeacyl-CoA thioester hydrolase3e-58223
NC_014029:2138000:214148321414832141932450Yersinia pestis Z176003 chromosome, complete genomeputative acyl-CoA thioester hydrolase3e-58223
NC_017168:3290380:329038032903803290829450Yersinia pestis A1122 chromosome, complete genomeacyl-CoA esterase3e-58223
NC_017265:1765399:178670817867081787157450Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,esterase3e-58223
NC_017505:926801:932339932339932785447Neisseria meningitidis alpha710 chromosome, complete genomeputative acyl-CoA hydrolase5e-41166
NC_008767:877904:899185899185899631447Neisseria meningitidis FAM18, complete genomeputative acyl-CoA hydrolase5e-41166
NC_017513:887344:908279908279908725447Neisseria meningitidis G2136 chromosome, complete genomethioesterase family protein5e-41166
NC_002946:1020175:103678910367891037235447Neisseria gonorrhoeae FA 1090, complete genomeputative acyl-CoA hydrolase6e-41165
NC_017511:543583:546311546311546880570Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative acyl-CoA hydrolase8e-41165
NC_011035:566980:568429568429568998570Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative acyl-CoA hydrolase1e-40165
NC_009483:936000:936065936065936490426Geobacter uraniireducens Rf4 chromosome, complete genomethioesterase superfamily protein2e-34144
NC_010410:513298:531272531272531694423Acinetobacter baumannii AYE, complete genomeputative acyl-CoA thioester hydrolase1e-29127
NC_010611:3381500:338206633820663382488423Acinetobacter baumannii ACICU, complete genomeAcyl-CoA hydrolase6e-29125
NC_009952:592000:596472596472596903432Dinoroseobacter shibae DFL 12, complete genomethioesterase superfamily protein3e-28123
NC_010338:4530403:455160845516084552045438Caulobacter sp. K31, complete genomethioesterase superfamily protein8e-26115
NC_011894:6793497:680987768098776810326450Methylobacterium nodulans ORS 2060, complete genomethioesterase superfamily protein1e-24112
NC_014006:63000:650776507765454378Sphingobium japonicum UT26S chromosome 1, complete genomeacyl-CoA hydrolase6e-25112
NC_008048:2838769:285587228558722856264393Sphingopyxis alaskensis RB2256, complete genomethioesterase superfamily5e-24109
NC_015593:2447844:245104624510462451423378Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completethioesterase superfamily protein1e-23108
NC_007484:882341:897532897532897951420Nitrosococcus oceani ATCC 19707, complete genomeThioesterase superfamily1e-2098.2
NC_014315:2485527:248935824893582489780423Nitrosococcus watsoni C-113 chromosome, complete genomethioesterase superfamily protein1e-1995.1
NC_020134:301500:315905315905316402498Clostridium stercorarium subsp. stercorarium DSM 8532, completethioesterase superfamily protein YciA3e-1373.9
NC_007795:1922000:196837919683791968909531Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein2e-1168.2
NC_010334:2131939:213193921319392132430492Shewanella halifaxensis HAW-EB4, complete genomethioesterase superfamily protein3e-1167.4
NC_012687:586657:605283605283605765483Chlamydia trachomatis B/TZ1A828/OT chromosome, complete genomeacyl-CoA hydrolase1e-1065.1
NC_012686:586714:605345605345605827483Chlamydia trachomatis B/Jali20/OT chromosome, complete genomeacyl-CoA hydrolase1e-1065.1
NC_015744:900000:920810920810921292483Chlamydia trachomatis L2c chromosome, complete genomethioesterase superfamily protein1e-1065.1
NC_010287:899945:921341921341921823483Chlamydia trachomatis 434/Bu, complete genomeacyl-CoA hydrolase1e-1065.1
NC_000117:581987:602745602745603227483Chlamydia trachomatis D/UW-3/CX, complete genomeAcyl-CoA Thioester Hydrolase1e-1065.1
NC_007429:585774:605453605453605935483Chlamydia trachomatis A/HAR-13, complete genomeacyl-CoA hydrolase1e-1065.1
NC_010280:899974:921369921369921851483Chlamydia trachomatis L2b/UCH-1/proctitis, complete genomeacyl-CoA hydrolase1e-1065.1
NC_016798:586689:605315605315605797483Chlamydia trachomatis A2497, complete genomeacyl-CoA hydrolase1e-1065.1
NC_017429:583327:603006603006603488483Chlamydia trachomatis G/9768 chromosome, complete genomeacyl-CoA hydrolase1e-1065.1
NC_017430:582000:602562602562603044483Chlamydia trachomatis G/11222 chromosome, complete genomeacyl-CoA hydrolase1e-1065.1
NC_017440:583392:603071603071603553483Chlamydia trachomatis G/11074 chromosome, complete genomeacyl-CoA hydrolase1e-1065.1
NC_017439:583513:603176603176603658483Chlamydia trachomatis E/150 chromosome, complete genomeacyl-CoA hydrolase1e-1065.1
NC_017437:586692:605318605318605800483Chlamydia trachomatis A2497 chromosome, complete genomeacyl-CoA hydrolase1e-1065.1
NC_017436:581986:602744602744603226483Chlamydia trachomatis D-LC chromosome, complete genomeacyl-CoA hydrolase1e-1065.1
NC_017434:581988:602746602746603228483Chlamydia trachomatis D-EC chromosome, complete genomeacyl-CoA hydrolase1e-1065.1
NC_017432:583328:603007603007603489483Chlamydia trachomatis G/9301 chromosome, complete genomeacyl-CoA hydrolase1e-1065.1
NC_017431:583529:603192603192603674483Chlamydia trachomatis E/11023 chromosome, complete genomeacyl-CoA hydrolase1e-1065.1
NC_002620:936869:954999954999955478480Chlamydia muridarum Nigg, complete genomecytosolic acyl-CoA thioester hydrolase family protein2e-1064.7
NC_015947:223184:231761231761232162402Burkholderia sp. JV3 chromosome, complete genomethioesterase superfamily protein2e-1064.3
NC_015275:3407358:343949834394983439899402Clostridium lentocellum DSM 5427 chromosome, complete genomethioesterase superfamily protein3e-1063.9
NC_014376:3547218:355503335550333555506474Clostridium saccharolyticum WM1 chromosome, complete genomethioesterase superfamily protein5e-1063.2
NC_015637:325561:344101344101344640540Vibrio anguillarum 775 chromosome chromosome II, complete sequenceAcyl-CoA hydrolase2e-0960.8
NC_017387:1110412:112629611262961126811516Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeacyl-CoA hydrolase3e-0960.5
NC_012912:2901021:290775029077502908145396Dickeya zeae Ech1591, complete genomethioesterase superfamily protein8e-0958.9
NC_017506:1507943:151336015133601513839480Marinobacter adhaerens HP15 chromosome, complete genomethioesterase superfamily protein2e-0858.2
NC_014500:1862000:191289819128981913293396Dickeya dadantii 3937 chromosome, complete genomecytosolic long-chain acyl-CoA thioester hydrolase family protein3e-0857.4
NC_012880:2871480:287555028755502875945396Dickeya dadantii Ech703, complete genomethioesterase superfamily protein3e-0857.4
NC_007298:3764048:376943237694323769920489Dechloromonas aromatica RCB, complete genomeThioesterase superfamily3e-0857.4
NC_003063:1128370:115192311519231152753831Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein5e-0856.6
NC_015948:1131628:113373811337381134181444Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeacyl-CoA thioester hydrolase1e-0755.1
NC_011146:3537546:355657935565793557013435Geobacter bemidjiensis Bem, complete genomethioesterase superfamily protein2e-0754.7
NC_015434:2527412:255273225527322553244513Verrucosispora maris AB-18-032 chromosome, complete genomethioesterase superfamily protein3e-0753.9
NC_017276:85380:853808538086336957Sulfolobus islandicus REY15A chromosome, complete genomethioesterase superfamily protein1e-0651.6
NC_003305:922357:922357922357922833477Agrobacterium tumefaciens str. C58 chromosome linear, completeacyl-CoA hydrolase2e-0651.2
NC_012108:2037429:204116920411692041675507Desulfobacterium autotrophicum HRM2, complete genomeAcyl-CoA thioester hydrolase3e-0650.4