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Query: NC_007356:1221500 Dehalococcoides sp. CBDB1, complete genome

Start: 1221500, End: 1250002, Length: 28503

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This strain was isolated from an enriched chlorobenzene-dechlorinatng mixed culture from anoxic river sediment. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002936:28552728552730889723371Dehalococcoides ethenogenes 195, complete genome2e-103385BLASTN svgBLASTP svg
NC_002936:149100*14910017314324044Dehalococcoides ethenogenes 195, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002936:1395432*1395432141906223631Dehalococcoides ethenogenes 195, complete genome0950BLASTN svgBLASTP svg
NC_020387:12571631257163129252735365Dehalococcoides mccartyi BTF08, complete genome4e-49204BLASTN svgBLASTP svg
NC_007356:51080*5108010028549206Dehalococcoides sp. CBDB1, complete genome01259BLASTN svgBLASTP svg
NC_007356:1165760*1165760121147545716Dehalococcoides sp. CBDB1, complete genome01027BLASTN svgBLASTP svg
NC_013890:11759311175931119809922169Dehalococcoides sp. GT chromosome, complete genome01485BLASTN svgBLASTP svg
NC_013890:10380710380712349519689Dehalococcoides sp. GT chromosome, complete genome0932BLASTN svgBLASTP svg
NC_013552:12400731240073126353423462Dehalococcoides sp. VS, complete genome4e-157563BLASTN svgBLASTP svg
NC_013552:11872991187299123459947301Dehalococcoides sp. VS, complete genome4e-1591.7BLASTN svgBLASTP svg