Some Help

Query: NC_007356:1165760 Dehalococcoides sp. CBDB1, complete genome

Start: 1165760, End: 1211475, Length: 45716

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This strain was isolated from an enriched chlorobenzene-dechlorinatng mixed culture from anoxic river sediment. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013890:11759311175931119809922169Dehalococcoides sp. GT chromosome, complete genome016760BLASTN svgBLASTP svg
NC_020387:12571631257163129252735365Dehalococcoides mccartyi BTF08, complete genome04861BLASTN svgBLASTP svg
NC_013552:11872991187299123459947301Dehalococcoides sp. VS, complete genome04742BLASTN svgBLASTP svg
NC_013890:11425001142500117062628127Dehalococcoides sp. GT chromosome, complete genome03713BLASTN svgBLASTP svg
NC_007356:51080*5108010028549206Dehalococcoides sp. CBDB1, complete genome01419BLASTN svgBLASTP svg
NC_013890:10380710380712349519689Dehalococcoides sp. GT chromosome, complete genome01294BLASTN svgBLASTP svg
NC_020387:745353*74535376435118999Dehalococcoides mccartyi BTF08, complete genome01283BLASTN svgBLASTP svg
NC_002936:1395432*1395432141906223631Dehalococcoides ethenogenes 195, complete genome01277BLASTN svgBLASTP svg
NC_013552:680036800310309935097Dehalococcoides sp. VS, complete genome01247BLASTN svgBLASTP svg
NC_007356:12215001221500125000228503Dehalococcoides sp. CBDB1, complete genome0993BLASTN svgBLASTP svg
NC_013552:12400731240073126353423462Dehalococcoides sp. VS, complete genome0724BLASTN svgBLASTP svg
NC_002936:28552728552730889723371Dehalococcoides ethenogenes 195, complete genome7e-138500BLASTN svgBLASTP svg