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Query: NC_007356:1221500:1243354 Dehalococcoides sp. CBDB1, complete genome

Start: 1243354, End: 1244211, Length: 858

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This strain was isolated from an enriched chlorobenzene-dechlorinatng mixed culture from anoxic river sediment. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002936:67896:872348723488049816Dehalococcoides ethenogenes 195, complete genomeradical SAM domain protein2e-80298
NC_007356:1221500:124420812442081244966759Dehalococcoides sp. CBDB1, complete genomeradical SAM domain protein1e-74279
NC_002936:67896:863868638687237852Dehalococcoides ethenogenes 195, complete genomeradical SAM domain protein2e-59229
NC_013552:68003:711257112571871747Dehalococcoides sp. VS, complete genomeradical SAM domain protein3e-59228
NC_007356:202131:217919217919218665747Dehalococcoides sp. CBDB1, complete genomeradical SAM domain protein9e-58223
NC_007356:202131:219395219395220231837Dehalococcoides sp. CBDB1, complete genomeradical SAM domain protein4e-47188
NC_013552:68003:695586955870382825Dehalococcoides sp. VS, complete genomeradical SAM domain protein1e-46187
NC_013552:68003:680036800368743741Dehalococcoides sp. VS, complete genomeradical SAM domain protein1e-40166
NC_009455:273519:292229292229292978750Dehalococcoides sp. BAV1 chromosome, complete genomeradical SAM domain-containing protein3e-38159
NC_007356:51080:788437884379592750Dehalococcoides sp. CBDB1, complete genomeradical SAM domain protein2e-38159
NC_007356:202131:221047221047221787741Dehalococcoides sp. CBDB1, complete genomeradical SAM domain protein2e-38159
NC_013552:68003:941989419894947750Dehalococcoides sp. VS, complete genomeradical SAM domain protein1e-35150
NC_014314:1:144571445715236780Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeradical SAM domain-containing protein2e-34146
NC_008701:1310857:133341813334181334218801Pyrobaculum islandicum DSM 4184, complete genomeRadical SAM domain protein2e-1996.7
NC_013156:1240926:125357012535701254259690Methanocaldococcus fervens AG86, complete genomeRadical SAM domain protein3e-1582.4
NC_000916:31459:385843858439336753Methanothermobacter thermautotrophicus str. Delta H, completemolybdenum cofactor biosynthesis A (MoaA) related protein7e-1478.2
NC_014364:2717865:2723648272364827246611014Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeRadical SAM domain protein2e-0653.1
NC_009454:2502724:253056025305602531471912Pelotomaculum thermopropionicum SI, complete genomepyruvate-formate lyase-activating enzyme6e-0651.6
NC_016584:5625975:563927856392785640246969Desulfosporosinus orientis DSM 765 chromosome, complete genomeglycyl-radical enzyme activator family protein8e-0651.2