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Query: NC_007356:1221500:1242331 Dehalococcoides sp. CBDB1, complete genome

Start: 1242331, End: 1243011, Length: 681

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This strain was isolated from an enriched chlorobenzene-dechlorinatng mixed culture from anoxic river sediment. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007356:51080:641086410864872765Dehalococcoides sp. CBDB1, complete genomehypothetical protein3e-116417
NC_007356:51080:713287132872092765Dehalococcoides sp. CBDB1, complete genomehypothetical protein1e-115416
NC_013890:103807:109706109706110470765Dehalococcoides sp. GT chromosome, complete genomeprotein of unknown function DUF1051e-115415
NC_007356:1165760:118728611872861188050765Dehalococcoides sp. CBDB1, complete genomehypothetical protein3e-115414
NC_002936:1395432:140250514025051403269765Dehalococcoides ethenogenes 195, complete genomehypothetical protein6e-115412
NC_013552:1240073:125542512554251256192768Dehalococcoides sp. VS, complete genomeCbiZ domain protein1e-110399
NC_002936:285527:300832300832301614783Dehalococcoides ethenogenes 195, complete genomehypothetical protein2e-108391
NC_013552:68003:687496874969528780Dehalococcoides sp. VS, complete genomeadenosylcobinamide amidohydrolase, CbiZ2e-57222
NC_007356:202131:220262220262221041780Dehalococcoides sp. CBDB1, complete genomehypothetical protein1e-56219
NC_011059:1391734:1414178141417814153591182Prosthecochloris aestuarii DSM 271, complete genomeprotein of unknown function DUF1053e-1789
NC_018870:354164:3560273560273571361110Thermacetogenium phaeum DSM 12270 chromosome, complete genomeadenosylcobinamide amidohydrolase CbiZ8e-1684
NC_014002:1357393:1374953137495313760891137Methanohalophilus mahii DSM 5219 chromosome, complete genomeprotein of unknown function DUF1054e-1581.3
NC_015474:105075:124660124660125244585Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein7e-0857.4
NC_010382:1020516:1020516102051610219761461Lysinibacillus sphaericus C3-41, complete genomeiron transport system ATP-binding protein8e-0650.8