Pre_GI: BLASTP Hits

Some Help

Query: NC_007356:1221500:1225085 Dehalococcoides sp. CBDB1, complete genome

Start: 1225085, End: 1225819, Length: 735

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This strain was isolated from an enriched chlorobenzene-dechlorinatng mixed culture from anoxic river sediment. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007356:51080:795897958980335747Dehalococcoides sp. CBDB1, complete genomehypothetical protein2e-133474
NC_013552:68003:896818968190409729Dehalococcoides sp. VS, complete genomePP-loop ATPase1e-71269
NC_009455:273519:296763296763297491729Dehalococcoides sp. BAV1 chromosome, complete genomeputative ATP binding protein2e-71268
NC_007356:51080:741717417175037867Dehalococcoides sp. CBDB1, complete genomehypothetical protein4e-59228
NC_013552:68003:718747187472626753Dehalococcoides sp. VS, complete genomePP-loop ATPase6e-58224
NC_007356:202131:217167217167217922756Dehalococcoides sp. CBDB1, complete genomehypothetical protein7e-58223
NC_011296:1151346:115500411550041155663660Thermodesulfovibrio yellowstonii DSM 11347, complete genomedomain of unknown function, putative3e-41168
NC_002936:285527:2968752968752985931719Dehalococcoides ethenogenes 195, complete genometranscriptional regulator, putative9e-38157
NC_009617:1487110:150320215032021503864663Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeATP-binding protein2e-28126
NC_020291:1593143:160856116085611609217657Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomePP-loop superfamily ATP-utilizing enzyme4e-28125
NC_012883:1603744:160775616077561608445690Thermococcus sibiricus MM 739, complete genomeATP-binding protein1e-22106
NC_019942:1270060:128203912820391282704666Aciduliprofundum sp. MAR08-339, complete genomeuniversal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein8e-22103
NC_009718:1470972:148152114815211482162642Fervidobacterium nodosum Rt17-B1, complete genomeputative ATP binding protein6e-1994.4
NC_013665:2132000:213201121320112132673663Methanocella paludicola SANAE, complete genomehypothetical protein9e-1994
NC_013926:1037681:105188410518841052549666Aciduliprofundum boonei T469 chromosome, complete genomeATP binding protein3e-1789
NC_015562:1386535:138875613887561389424669Methanotorris igneus Kol 5 chromosome, complete genomehypothetical protein4e-1788.2
NC_014122:247660:248574248574249245672Methanocaldococcus infernus ME chromosome, complete genomeATP binding protein1e-1583.2
NC_011184:2723000:274095727409572741628672Vibrio fischeri MJ11 chromosome I, complete sequenceconserved domain protein, putative1e-1583.2
NC_015636:1477221:149738414973841498052669Methanothermococcus okinawensis IH1 chromosome, complete genomeuniversal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter protein4e-1581.6
NC_009954:1595743:161302316130231613727705Caldivirga maquilingensis IC-167, complete genomeputative ATP binding protein5e-1581.6
NC_013741:565389:576115576115576789675Archaeoglobus profundus DSM 5631, complete genomeATP binding protein5e-1581.6
NC_015320:790137:805434805434806102669Archaeoglobus veneficus SNP6 chromosome, complete genomeuniversal metal-binding-domain/4Fe-4S-binding-domain-containing ABC transporter protein1e-1480.1
NC_012589:1434707:145779414577941458462669Sulfolobus islandicus L.S.2.15, complete genomeATP binding protein2e-1375.9
NC_012622:1333000:134716713471671347835669Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeATP-binding protein3e-1375.5
NC_000868:571500:571740571740572372633Pyrococcus abyssi GE5, complete genomehypothetical protein9e-1373.9
NC_014658:620819:641961641961642638678Methanothermus fervidus DSM 2088 chromosome, complete genomeATP binding protein2e-1272.8
NC_014314:1:152361523615963728Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete5e-1271.6
NC_014160:43486:689846898469667684Thermosphaera aggregans DSM 11486 chromosome, complete genomeATP binding protein1e-1170.1
NC_008942:915871:930511930511931167657Methanocorpusculum labreanum Z, complete genomeTryptophan synthase3e-1168.6
NC_005213:202400:2671162671162682461131Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein7e-1064.3
NC_015474:105075:127436127436128080645Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein1e-0963.5
NC_000854:278711:297397297397298113717Aeropyrum pernix K1, complete genomehypothetical protein4e-0962
NC_011832:1122268:112349111234911124147657Candidatus Methanosphaerula palustris E1-9c, complete genomeATP binding protein2e-0756.2
NC_015931:134601:145654145654146238585Pyrolobus fumarii 1A, complete genomehypothetical protein6e-0754.7