Pre_GI: BLASTP Hits

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Query: NC_007356:1165760:1207158 Dehalococcoides sp. CBDB1, complete genome

Start: 1207158, End: 1208789, Length: 1632

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This strain was isolated from an enriched chlorobenzene-dechlorinatng mixed culture from anoxic river sediment. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013890:1175931:1183008118300811846391632Dehalococcoides sp. GT chromosome, complete genomeCRISPR-associated protein, Cse1 family01074
NC_008609:2518993:2530397253039725319171521Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated protein, Cse1 family1e-37158
NC_015387:942974:9539549539549554561503Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein, Cse1 family3e-34147
NC_017186:6395435:6448037644803764496171581Amycolatopsis mediterranei S699 chromosome, complete genomeCRISPR-associated protein CSE15e-33142
NC_014318:6395392:6447993644799364495731581Amycolatopsis mediterranei U32 chromosome, complete genomeCRISPR-associated protein CSE15e-33142
NC_007775:723925:7380367380367396101575Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein, Cse1 family2e-26120
NC_007164:775000:7816397816397833241686Corynebacterium jeikeium K411, complete genomehypothetical protein1e-20102
NC_015389:481282:4896294896294913531725Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated protein, Cse1 family2e-20101
NC_018720:1812000:1819002181900218207591758Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated protein, Cse1 family2e-20100
NC_019673:1988853:2040551204055120422031653Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated Cse1 family protein2e-20100
NC_013131:4422000:4432703443270344373254623Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein, Cse1 family8e-1995.9
NC_012590:977920:9865899865899883341746Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein5e-1893.2
NC_013510:3117837:3131141313114131328261686Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein, Cse1 family2e-1790.9
NC_007333:1743890:1843065184306518447321668Thermobifida fusca YX, complete genomehypothetical protein2e-1790.9
NC_006361:4574536:4589051458905145907091659Nocardia farcinica IFM 10152, complete genomehypothetical protein7e-1685.9
NC_015951:107360:1121481121481137581611Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeCRISPR-associated protein, Cse1 family1e-1585.1
NC_016109:603829:6185766185766202881713Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein3e-1480.5
NC_015170:54000:6009760097616681572Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated protein, Cse1 family4e-1273.6
NC_014210:1588426:1588426158842615901471722Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,CRISPR-associated protein, Cse1 family1e-1172
NC_015737:2146953:2154718215471821564721755Clostridium sp. SY8519, complete genomehypothetical protein2e-1171.2
NC_008278:514600:5227265227265241981473Frankia alni ACN14a, complete genomehypothetical protein; putative IMP dehydrogenase/GMP reductase domains2e-1170.9
NC_012912:1053618:1057508105750810590311524Dickeya zeae Ech1591, complete genomeCRISPR-associated protein, Cse1 family2e-1170.9
NC_010610:795975:8092088092088107851578Lactobacillus fermentum IFO 3956, complete genomehypothetical protein5e-0963.2
NC_013159:1422370:1430835143083514322891455Saccharomonospora viridis DSM 43017, complete genomeCRISPR-associated protein, Cse1 family5e-0859.7