Pre_GI: BLASTP Hits

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Query: NC_007355:2838952:2859144 Methanosarcina barkeri str. fusaro chromosome 1, complete sequence

Start: 2859144, End: 2859569, Length: 426

Host Lineage: Methanosarcina barkeri; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: Methanosarcina barkeri strain Fusaro was isolated from mud samples taken from the freshwater lake, Lago del Fusaro near Naples, Italy. This organism is a strictly anaerobic, non-motile, methane-producing archaeon and has been found in marine mud, rumens of ungulates, lagoons polluted with animal waste and sludge from anaerobic sewage digestors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003552:2133590:215101021510102151447438Methanosarcina acetivorans C2A, complete genometranscriptional regulator, CopG family1e-36151
NC_015416:2113949:213483821348382135245408Methanosaeta concilii GP-6 chromosome, complete genomeCopG family transcriptional regulator6e-36149
NC_015680:369777:385309385309385725417Pyrococcus yayanosii CH1 chromosome, complete genometranscription nickel responsive regulator (nikR)2e-28124
NC_013156:728397:748013748013748438426Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family3e-28123
NC_000909:467607:485578485578486003426Methanocaldococcus jannaschii DSM 2661, complete genomenickel responsive regulator6e-28122
NC_000868:1386592:139771213977121398128417Pyrococcus abyssi GE5, complete genomenickel responsive regulator6e-24109
NC_019942:987134:103530410353041035708405Aciduliprofundum sp. MAR08-339, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain2e-2098.2
NC_011146:4070000:407565140756514076070420Geobacter bemidjiensis Bem, complete genomeputative transcriptional regulator, CopG family2e-1891.3
NC_006396:2025500:203044520304452030855411Haloarcula marismortui ATCC 43049 chromosome I, complete sequencetranscriptional regulator CopG family2e-1890.9
NC_012912:242709:263936263936264355420Dickeya zeae Ech1591, complete genometranscriptional regulator NikR, CopG family5e-1889.7
NC_008212:2978786:299626729962672996806540Haloquadratum walsbyi DSM 16790, complete genometranscription regulator; probably nickel responsive regulator2e-1684.3
NC_019940:3089884:310346431034643103886423Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator3e-1683.6
NC_008340:2272692:228003322800332280452420Alkalilimnicola ehrlichei MLHE-1, complete genomeputative transcriptional regulator, CopG family5e-1682.8
NC_019978:315346:320567320567320980414Halobacteroides halobius DSM 5150, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain1e-1582
NC_004917:340997:341634341634342065432Helicobacter hepaticus ATCC 51449, complete genomenickel responsive regulator2e-1581.3
NC_013508:275081:292753292753293199447Edwardsiella tarda EIB202, complete genomenickel responsive regulator2e-1477.8
NC_004741:4160500:418449041844904184891402Shigella flexneri 2a str. 2457T, complete genomenickel responsive regulator5e-1476.6
NC_020388:1582817:158833215883321588721390Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator1e-1375.1
NC_019962:1875952:189258418925841892991408Natrinema pellirubrum DSM 15624, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain3e-1373.9
NC_012779:261438:275788275788276225438Edwardsiella ictaluri 93-146, complete genomenickel-responsive transcriptional regulator NikR, putative6e-1372.8
NC_020388:1582817:158544315854431585907465Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator2e-1168.2
NC_019974:2421422:243945524394552439892438Natronococcus occultus SP4, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain2e-1167.8
NC_013959:83992:101591101591102100510Sideroxydans lithotrophicus ES-1 chromosome, complete genometranscriptional regulator NikR, CopG family4e-1167
NC_020388:1428042:143786614378661438255390Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator5e-1166.2
NC_013964:161105:169317169317169745429Haloferax volcanii DS2 plasmid pHV3, complete sequenceRibbon-helix-helix protein, copG family domain protein6e-1166.2
NC_007520:1940120:196002519600251960498474Thiomicrospira crunogena XCL-2, complete genomeputative transcriptional regulator, CopG family6e-1166.2
NC_015562:436128:451651451651452046396Methanotorris igneus Kol 5 chromosome, complete genometranscriptional regulator NikR8e-1165.9
NC_020388:1582817:159309715930971593525429Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator3e-1063.9
NC_014820:1087153:110315611031561103551396Cenarchaeum symbiosum A, complete genometranscriptional regulator5e-1063.2
NC_006396:1097000:110280211028021103221420Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceputative nickel responsive regulator5e-1063.2
NC_014729:1908086:191297319129731913380408Halogeometricum borinquense DSM 11551 chromosome, complete genometranscriptional regulator with copg/arc/metj DNA-binding domain and metal-binding domain2e-0960.8
NC_008701:168662:184589184589184987399Pyrobaculum islandicum DSM 4184, complete genomeputative transcriptional regulator, CopG family4e-0960.5
NC_016070:167362:187502187502187894393Thermoproteus tenax Kra 1, complete genomeCopG/MetJ family transcriptional regulator4e-0960.1
NC_013887:407771:419348419348419731384Methanocaldococcus sp. FS406-22 chromosome, complete genometranscriptional regulator NikR, CopG family9e-0958.9
NC_013156:381910:396265396265396645381Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family7e-0855.8
NC_000909:67729:737997379974182384Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein9e-0855.8
NC_010510:310938:327484327484327945462Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeputative transcriptional regulator, CopG family5e-0753.1
NC_020388:1582817:159240415924041592853450Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator3e-0650.4