Pre_GI: BLASTP Hits

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Query: NC_007348:2519447:2538598 Ralstonia eutropha JMP134 chromosome 2, complete sequence

Start: 2538598, End: 2539335, Length: 738

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020829:4390417:441078344107834411283501Pseudomonas denitrificans ATCC 13867, complete genomeTetR family transcriptional regulator2e-24112
NC_008577:4611431:462302146230214623644624Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, TetR family5e-23107
NC_005773:866157:882507882507883145639Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, TetR family2e-0859.7
NC_016641:1369424:137716413771641377715552Paenibacillus terrae HPL-003 chromosome, complete genomeTetR family transcriptional regulator2e-0755.8
NC_013854:1277106:128092412809241281535612Azospirillum sp. B510, complete genometranscriptional regulator4e-0755.1
NC_013947:1537275:155337215533721554025654Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family1e-0653.5
NC_014666:8016066:802999880299988030690693Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, TetR family2e-0653.1
NC_009138:2242470:224174522417452242473729Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative Transcriptional regulator3e-0652.4