Pre_GI: BLASTN Hits

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Query: NC_007347:3204637 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 3204637, End: 3235485, Length: 30849

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007347:31886143188614321224723634Ralstonia eutropha JMP134 chromosome 1, complete sequence015090BLASTN svgBLASTP svg
NC_005085:24572952457295248428326989Chromobacterium violaceum ATCC 12472, complete genome01376BLASTN svgBLASTP svg
NC_010645:3239420*3239420326166922250Bordetella avium 197N, complete genome01047BLASTN svgBLASTP svg
NC_016002:1975000*1975000202494749948Pseudogulbenkiania sp. NH8B, complete genome0918BLASTN svgBLASTP svg
NC_010804:450130*45013047811127982Burkholderia multivorans ATCC 17616 chromosome 1, complete0702BLASTN svgBLASTP svg
NC_007404:20480002048000206896120962Thiobacillus denitrificans ATCC 25259, complete genome0670BLASTN svgBLASTP svg
NC_009439:34850003485000350721722218Pseudomonas mendocina ymp, complete genome2e-168601BLASTN svgBLASTP svg
NC_011901:27399842739984276222422241Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete4e-166593BLASTN svgBLASTP svg
NC_008463:4389721*4389721441663526915Pseudomonas aeruginosa UCBPP-PA14, complete genome6e-159569BLASTN svgBLASTP svg
NC_002516:1236644*1236644126316626523Pseudomonas aeruginosa PAO1, complete genome2e-156561BLASTN svgBLASTP svg
NC_011770:45915004591500460979518296Pseudomonas aeruginosa LESB58, complete genome9e-152545BLASTN svgBLASTP svg
NC_013889:1514799*1514799153542720629Thioalkalivibrio sp. K90mix chromosome, complete genome2e-143517BLASTN svgBLASTP svg
NC_015410:3791500*3791500381292521426Pseudomonas mendocina NK-01 chromosome, complete genome5e-138500BLASTN svgBLASTP svg
NC_009434:17436961743696176409920404Pseudomonas stutzeri A1501, complete genome2e-134488BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete7e-134486BLASTN svgBLASTP svg
NC_013959:26663212666321269260826288Sideroxydans lithotrophicus ES-1 chromosome, complete genome3e-124454BLASTN svgBLASTP svg
NC_015556:18998501899850192183821989Pseudomonas fulva 12-X chromosome, complete genome1e-123452BLASTN svgBLASTP svg
NC_019902:23720972372097239285820762Thioalkalivibrio nitratireducens DSM 14787, complete genome3e-108400BLASTN svgBLASTP svg
NC_005773:4282840*4282840431412131282Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-94355BLASTN svgBLASTP svg
NC_019940:13093591309359133197622618Thioflavicoccus mobilis 8321 chromosome, complete genome3e-87331BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome9e-75289BLASTN svgBLASTP svg
NC_002928:507749*50774956809960351Bordetella parapertussis 12822, complete genome9e-75289BLASTN svgBLASTP svg
NC_002927:506183*50618356896162779Bordetella bronchiseptica RB50, complete genome9e-75289BLASTN svgBLASTP svg
NC_007925:39113233911323393315121829Rhodopseudomonas palustris BisB18, complete genome2e-72281BLASTN svgBLASTP svg
NC_015850:21476822147682217960631925Acidithiobacillus caldus SM-1 chromosome, complete genome3e-68268BLASTN svgBLASTP svg
NC_012559:23532362353236237609922864Laribacter hongkongensis HLHK9, complete genome5e-67264BLASTN svgBLASTP svg
NC_011206:22391092239109225942920321Acidithiobacillus ferrooxidans ATCC 53993, complete genome5e-64254BLASTN svgBLASTP svg
NC_015942:25444072544407256835223946Acidithiobacillus ferrivorans SS3 chromosome, complete genome2e-57232BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome2e-51212BLASTN svgBLASTP svg
NC_003296:19276161927616194986922254Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete5e-36161BLASTN svgBLASTP svg
NC_007974:93400093400095746723468Ralstonia metallidurans CH34 chromosome 2, complete sequence3e-34155BLASTN svgBLASTP svg
NC_020064:871338*87133889313221795Serratia marcescens FGI94, complete genome5e-33151BLASTN svgBLASTP svg
NC_015711:81697528169752821033740586Myxococcus fulvus HW-1 chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_008095:63234566323456634843724982Myxococcus xanthus DK 1622, complete genome3e-28135BLASTN svgBLASTP svg
NC_007005:44113884411388444643035043Pseudomonas syringae pv. syringae B728a, complete genome3e-22115BLASTN svgBLASTP svg
NC_015947:22318422318424748524302Burkholderia sp. JV3 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_009439:1075170*1075170109793122762Pseudomonas mendocina ymp, complete genome2e-20109BLASTN svgBLASTP svg
NC_010557:31600031600033917223173Burkholderia ambifaria MC40-6 chromosome 3, complete sequence7e-20107BLASTN svgBLASTP svg
NC_003295:34215203421520348536463845Ralstonia solanacearum GMI1000, complete genome1e-18103BLASTN svgBLASTP svg
NC_008313:34567413456741348341526675Ralstonia eutropha H16 chromosome 1, complete sequence3e-1695.6BLASTN svgBLASTP svg
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015556:41183044118304414271224409Pseudomonas fulva 12-X chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010162:56517465651746567447022725Sorangium cellulosum 'So ce 56', complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008740:25632782563278259344030163Marinobacter aquaeolei VT8, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_011071:35444503544450356909924650Stenotrophomonas maltophilia R551-3, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008463:5364428*5364428539303028603Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_003902:3666544*3666544374180275259Xanthomonas campestris pv. campestris str. ATCC 33913, complete4e-0971.9BLASTN svgBLASTP svg
NC_007086:1224867*1224867128273457868Xanthomonas campestris pv. campestris str. 8004, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009439:31040003104000312885524856Pseudomonas mendocina ymp, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010688:1192410*1192410126259970190Xanthomonas campestris pv. campestris, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete4e-0971.9BLASTN svgBLASTP svg
NC_014752:2087998*2087998211535127354Neisseria lactamica ST-640, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007952:31960853196085323399537911Burkholderia xenovorans LB400 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_007508:2277640*2277640230096223323Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008782:19176341917634194559927966Acidovorax sp. JS42, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015410:1144272*1144272116462620355Pseudomonas mendocina NK-01 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015947:35394723539472355883219361Burkholderia sp. JV3 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015873:1193843*1193843123304039198Megasphaera elsdenii DSM 20460, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015563:46294364629436465219622761Delftia sp. Cs1-4 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014931:60316456031645605636324719Variovorax paradoxus EPS chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_021150:34164503416450343409917650Azotobacter vinelandii CA6, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012560:34164513416451343409917649Azotobacter vinelandii DJ, complete genome4e-0661.9BLASTN svgBLASTP svg